RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 DRAP1Q14919 205 aaPredicted RBP13.01□□□□□ -0.33
SSR4-205ENST00000447375 SMAD1Q15797 465 aaKnown RBP13.01□□□□□ -0.33
SSR4-205ENST00000447375 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 PCSK4Q6UW60 755 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 TRMT11Q7Z4G4 463 aaKnown RBP13.01□□□□□ -0.33
SSR4-205ENST00000447375 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 SCML4Q8N228 414 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 FOXJ1Q92949 421 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 GANQ9H2C0 597 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 CCSER2Q9H7U1 834 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 NMUR1Q9HB89 426 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 ACP6Q9NPH0 428 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 CLIC5Q9NZA1 410 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 FHOD1Q9Y613 1164 aa13.01□□□□□ -0.33
SSR4-205ENST00000447375 ZNF462Q96JM2 2506 aa13□□□□□ -0.33
SSR4-205ENST00000447375 A0A1W2PQH9 124 aa13□□□□□ -0.33
SSR4-205ENST00000447375 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
SSR4-205ENST00000447375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13□□□□□ -0.33
SSR4-205ENST00000447375 PYCARD-AS1I3L0S3 204 aa13□□□□□ -0.33
SSR4-205ENST00000447375 M0QYV0 167 aa13□□□□□ -0.33
SSR4-205ENST00000447375 PLK4O00444 970 aa13□□□□□ -0.33
SSR4-205ENST00000447375 FLRT2O43155 660 aa13□□□□□ -0.33
SSR4-205ENST00000447375 TLX3O43711 291 aaPredicted RBP13□□□□□ -0.33
SSR4-205ENST00000447375 TLR5O60602 858 aa13□□□□□ -0.33
SSR4-205ENST00000447375 HOXB2P14652 356 aa13□□□□□ -0.33
SSR4-205ENST00000447375 GNA15P30679 374 aa13□□□□□ -0.33
SSR4-205ENST00000447375 MATKP42679 507 aa13□□□□□ -0.33
SSR4-205ENST00000447375 RPL34P49207 117 aaKnown RBP13□□□□□ -0.33
SSR4-205ENST00000447375 KLK7P49862 253 aa13□□□□□ -0.33
SSR4-205ENST00000447375 UBXN1Q04323 297 aa13□□□□□ -0.33
SSR4-205ENST00000447375 PTK2Q05397 1052 aa13□□□□□ -0.33
SSR4-205ENST00000447375 SYCP1Q15431 976 aa13□□□□□ -0.33
SSR4-205ENST00000447375 NFKBIBQ15653 356 aa13□□□□□ -0.33
SSR4-205ENST00000447375 CCDC157Q569K6 752 aa13□□□□□ -0.33
SSR4-205ENST00000447375 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
SSR4-205ENST00000447375 KLHDC10Q6PID8 442 aa13□□□□□ -0.33
SSR4-205ENST00000447375 RHBDF2Q6PJF5 856 aa13□□□□□ -0.33
SSR4-205ENST00000447375 IL27RAQ6UWB1 636 aa13□□□□□ -0.33
SSR4-205ENST00000447375 BHLHA9Q7RTU4 235 aa13□□□□□ -0.33
SSR4-205ENST00000447375 ARHGAP18Q8N392 663 aa13□□□□□ -0.33
SSR4-205ENST00000447375 ZNF513Q8N8E2 541 aaPredicted RBP13□□□□□ -0.33
SSR4-205ENST00000447375 STK32AQ8WU08 396 aa13□□□□□ -0.33
SSR4-205ENST00000447375 ZFRQ96KR1 1074 aaKnown RBP13□□□□□ -0.33
SSR4-205ENST00000447375 HSFY1Q96LI6 401 aa13□□□□□ -0.33
SSR4-205ENST00000447375 ERGIC2Q96RQ1 377 aa13□□□□□ -0.33
SSR4-205ENST00000447375 ULBP1Q9BZM6 244 aa13□□□□□ -0.33
SSR4-205ENST00000447375 CBX8Q9HC52 389 aa13□□□□□ -0.33
SSR4-205ENST00000447375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13□□□□□ -0.33
SSR4-205ENST00000447375 DAAM1Q9Y4D1 1078 aa13□□□□□ -0.33
SSR4-205ENST00000447375 PCDHGB2Q9Y5G2 931 aa13□□□□□ -0.33
SSR4-205ENST00000447375 CPQQ9Y646 472 aa13□□□□□ -0.33
SSR4-205ENST00000447375 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 THAP12O43422 761 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 TBX18O95935 607 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 RARGP13631 454 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 NDUFV2P19404 249 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 WASP42768 502 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 BPIFB4P59827 614 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 SEMG2Q02383 582 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 ADIGQ0VDE8 80 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 RAPGEF1Q13905 1077 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 SUZ12Q15022 739 aaKnown RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 HLA-BQ31612 363 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 SLC47A2Q86VL8 602 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
SSR4-205ENST00000447375 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 RTN4Q9NQC3 1192 aaKnown RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 CNGB3Q9NQW8 809 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 FAM207AQ9NSI2 230 aaPredicted RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 SMPD4Q9NXE4 827 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 NAGPAQ9UK23 515 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 PCDHGC3Q9UN70 934 aa12.99□□□□□ -0.33
SSR4-205ENST00000447375 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
SSR4-205ENST00000447375 A0A1W2PQF6 199 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 E2F8A0AVK6 867 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 MEI4A8MW99 385 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 F8VZ95 297 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 SCAMP3O14828 347 aaKnown RBP12.98□□□□□ -0.33
SSR4-205ENST00000447375 EPHB6O15197 1021 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 TNFSF14O43557 240 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 ADH1CP00326 375 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 PNMA6AP0CW24 399 aaPredicted RBP12.98□□□□□ -0.33
SSR4-205ENST00000447375 RALAP11233 206 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 LCP1P13796 627 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 NTSR1P30989 418 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 RGS7P49802 495 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 POLR2FP61218 127 aaKnown RBP12.98□□□□□ -0.33
SSR4-205ENST00000447375 YWHAGP61981 247 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSR4-205ENST00000447375 DHRS13Q6UX07 377 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 TADA2BQ86TJ2 420 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
SSR4-205ENST00000447375 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms