RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RALAP11233 206 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CORO1AP31146 461 aaKnown RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 ABL2P42684 1182 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CCR5P51681 352 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 MYL6P60660 151 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 GABREP78334 506 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 ZNF211Q13398 564 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 NUMA1Q14980 2115 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 PSMD6Q15008 389 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 BMT2Q1RMZ1 405 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 SLC45A4Q5BKX6 768 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 NCEH1Q6PIU2 408 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 ATG14Q6ZNE5 492 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 SV2BQ7L1I2 683 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 BRAPQ7Z569 592 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 FAM217AQ8IXS0 508 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CRYBG2Q8N1P7 616 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 OR2T34Q8NGX1 318 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 SLC2A14Q8TDB8 520 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 DDI1Q8WTU0 396 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 DEPDC7Q96QD5 511 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CGRRF1Q99675 332 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 RSPH9Q9H1X1 276 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 PABPC3Q9H361 631 aaKnown RBP7.41□□□□□ -1.22
LRRC28-203ENST00000447360 EBF2Q9HAK2 575 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 ASCL3Q9NQ33 180 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 AASDHPPTQ9NRN7 309 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 FBXL12Q9NXK8 326 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 HSPBP1Q9NZL4 362 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 NAGPAQ9UK23 515 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 NUDT5Q9UKK9 219 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 MTMR6Q9Y217 621 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 PCDHB1Q9Y5F3 818 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 CLIC4Q9Y696 253 aa7.41□□□□□ -1.22
LRRC28-203ENST00000447360 VPS37CA5D8V6 355 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 HHLA1C9JL84 531 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 WNT9AO14904 365 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 MAGEC1O60732 1142 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 RNASEH1O60930 286 aaKnown RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 USP12O75317 370 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 AFPP02771 609 aaKnown RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CCDC130P13994 396 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 IDEP14735 1019 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 PDCP20941 246 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 HOXD9P28356 352 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 HLA-FP30511 346 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 KIF11P52732 1056 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 ZNF445P59923 1031 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 SKOR1P84550 965 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 OVGP1Q12889 678 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 NFATC3Q12968 1075 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 KCNJ12Q14500 433 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 ARL13BQ3SXY8 428 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 MPPE1Q53F39 396 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 HS1BP3Q53T59 392 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CCDC81Q6ZN84 652 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 STXBP4Q6ZWJ1 553 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 GPRIN1Q7Z2K8 1008 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CCDC186Q7Z3E2 898 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 KIAA0907Q7Z7F0 614 aaPredicted RBP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 ACOT1Q86TX2 421 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 ADIPOR2Q86V24 386 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 IQCHQ86VS3 1027 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 DENND1CQ8IV53 801 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 AHI1Q8N157 1196 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 ZNF366Q8N895 744 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.4□□□□□ -1.22
LRRC28-203ENST00000447360 MFSD2AQ8NA29 543 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 GANCQ8TET4 914 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CYB5D2Q8WUJ1 264 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 GRAMD1AQ96CP6 724 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 VCPIP1Q96JH7 1222 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 SERAC1Q96JX3 654 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 TRIM4Q9C037 500 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 STARD5Q9NSY2 213 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 DACH1Q9UI36 760 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 FZD4Q9ULV1 537 aa7.4□□□□□ -1.22
LRRC28-203ENST00000447360 CKAP5Q14008 2032 aa7.4□□□□□ -1.23
LRRC28-203ENST00000447360 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.23
LRRC28-203ENST00000447360 TRIM38O00635 465 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SUV39H1O43463 412 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 LATO43561 262 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 SIGLEC6O43699 453 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 OPA1O60313 960 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 GP1BAP07359 652 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 CKMT1AP12532 417 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 GP1BBP13224 206 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 KRT10P13645 584 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 P4HA1P13674 534 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 TRIM21P19474 475 aaKnown RBP7.39□□□□□ -1.23
LRRC28-203ENST00000447360 INHBCP55103 352 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 DAB2P98082 770 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 CYP24A1Q07973 514 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 EFEMP1Q12805 493 aa7.39□□□□□ -1.23
LRRC28-203ENST00000447360 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms