RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TACR2P21452 398 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 SDC4P31431 198 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 SGSHP51688 502 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 MRPS21P82921 87 aaKnown RBP24.8■■□□□ 1.56
C9orf3-207ENST00000445181 ATP11AP98196 1134 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 MTA1Q13330 715 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 MS4A13Q5J8X5 152 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 OTUD1Q5VV17 481 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-207ENST00000445181 TRNP1Q6NT89 227 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 SARM1Q6SZW1 724 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 SYT13Q7L8C5 426 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 LGI2Q8N0V4 545 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 JOSD2Q8TAC2 188 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 RXFP2Q8WXD0 754 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 PGAP3Q96FM1 320 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-207ENST00000445181 SLC2A11Q9BYW1 496 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 TMEM51Q9NW97 253 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 FBXO10Q9UK96 956 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 CLEC4EQ9ULY5 219 aa24.8■■□□□ 1.56
C9orf3-207ENST00000445181 CCDC163A0A0D9SF12 145 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 F5H5T6 163 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 GFRA2O00451 464 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 DDX3XO00571 662 aaKnown RBP eCLIP24.79■■□□□ 1.563e-11■■■□□ 16.8
C9orf3-207ENST00000445181 RDXP35241 583 aaKnown RBP24.79■■□□□ 1.56
C9orf3-207ENST00000445181 DMC1Q14565 340 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 TSR1Q2NL82 804 aaKnown RBP24.79■■□□□ 1.56
C9orf3-207ENST00000445181 BRMS1LQ5PSV4 323 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 EMC10Q5UCC4 262 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 HGSNATQ68CP4 663 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 CCDC117Q8IWD4 279 aaPredicted RBP24.79■■□□□ 1.56
C9orf3-207ENST00000445181 CCDC33Q8N5R6 958 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 ALLCQ8N6M5 410 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 OLIG1Q8TAK6 271 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 VCPIP1Q96JH7 1222 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 PRICKLE1Q96MT3 831 aaPredicted RBP24.79■■□□□ 1.56
C9orf3-207ENST00000445181 HHIPQ96QV1 700 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 ADAM33Q9BZ11 813 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 TKTL2Q9H0I9 626 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 SLC27A6Q9Y2P4 619 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 SPTBN4Q9H254 2564 aa24.79■■□□□ 1.56
C9orf3-207ENST00000445181 ANTXRLA6NF34 631 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 KLF8O95600 359 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-207ENST00000445181 FTLP02792 175 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-207ENST00000445181 GZMAP12544 262 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 RRM1P23921 792 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 CXCR3P49682 368 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 CDO1Q16878 200 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 MPP7Q5T2T1 576 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 DCUN1D2Q6PH85 259 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 ANKS1BQ7Z6G8 1248 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 CFAP52Q8N1V2 620 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 ZNF513Q8N8E2 541 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-207ENST00000445181 RMDN1Q96DB5 314 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 USP18Q9UMW8 372 aa24.78■■□□□ 1.56
C9orf3-207ENST00000445181 C2CD4BA6NLJ0 364 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 SIGLEC16A6NMB1 481 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 PRRT4C9JH25 899 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RTN2O75298 545 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 PAGE1O75459 146 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ADCY5O95622 1261 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RETP07949 1114 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 GPD1P21695 349 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 TGM1P22735 817 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RFC1P35251 1148 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 KIR2DL1P43626 348 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ATXN1P54253 815 aaKnown RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RPS24P62847 133 aaKnown RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 C15orf59Q2T9L4 293 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 CCDC14Q49A88 953 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RABGAP1LQ5R372 815 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 TRMT11Q7Z4G4 463 aaKnown RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 MFN1Q8IWA4 741 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 CARNMT1Q8N4J0 409 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 TXNDC5Q8NBS9 432 aaKnown RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 GAB3Q8WWW8 586 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 MCEEQ96PE7 176 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ANP32EQ9BTT0 268 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 SIK2Q9H0K1 926 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 PARD6AQ9NPB6 346 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ZDHHC4Q9NPG8 344 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ZNHIT6Q9NWK9 470 aaKnown RBP24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ARHGEF38Q9NXL2 777 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 ADAMTS1Q9UHI8 967 aa24.77■■□□□ 1.56
C9orf3-207ENST00000445181 RPP40O75818 363 aaKnown RBP24.76■■□□□ 1.55
C9orf3-207ENST00000445181 APBB3O95704 486 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 PLEKP08567 350 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-207ENST00000445181 SPEM2Q0P670 501 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 GEN1Q17RS7 908 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 HSF5Q4G112 596 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-207ENST00000445181 WDR59Q6PJI9 974 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 TMC6Q7Z403 805 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 FAM131BQ86XD5 332 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 GAS2L3Q86XJ1 694 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 DNAAF5Q86Y56 855 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 FAM160A2Q8N612 972 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-207ENST00000445181 ZNF557Q8N988 423 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-207ENST00000445181 IL17RCQ8NAC3 791 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 OR8K1Q8NGG5 319 aa24.76■■□□□ 1.55
C9orf3-207ENST00000445181 KCNV2Q8TDN2 545 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms