RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MROH2BQ7Z745 1585 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 RFX6Q8HWS3 928 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC2A12Q8TD20 617 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 CELF1Q92879 486 aaKnown RBP5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 C5orf34Q96MH7 638 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 NPAS1Q99742 590 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 EFHD1Q9BUP0 239 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 CECR2Q9BXF3 1484 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 ASNSD1Q9NWL6 643 aa5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 SIRT4Q9Y6E7 314 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3DA0A087WVF3 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3IA0A087WXS9 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3EA0A087X179 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3KA0A087X1G2 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3BA6NDS4 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3FA6NER0 549 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3LB9A6J9 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 IRAK2O43187 625 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3HP0C7X1 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 HSD3B1P14060 373 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC8A1P32418 973 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 AARSP49588 968 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 PPM1FP49593 454 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 RCAN1P53805 252 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC37A1P57057 533 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 MRPS21P82921 87 aaKnown RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 SHC2P98077 582 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 RNASELQ05823 741 aaKnown RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 PFKFB3Q16875 520 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBRG1Q3YBR2 411 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 LRRC24Q50LG9 513 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3GQ6DHY5 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 DGAT2L7PQ6IED9 249 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3CQ6IPX1 549 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 KIAA1324Q6UXG2 1013 aaKnown RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 SLC39A5Q6ZMH5 540 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 ZNF813Q6ZN06 617 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 RASGRP2Q7LDG7 609 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TBC1D3Q8IZP1 549 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 CPXCR1Q8N123 301 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 AFG1LQ8WV93 481 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 TM2D2Q9BX73 214 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 CHMP4AQ9BY43 222 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 SAGE1Q9NXZ1 904 aa5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 COPG1Q9Y678 874 aaKnown RBP5.09□□□□□ -1.59
HMGB3P6-201ENST00000444896 UNC13AQ9UPW8 1703 aa5.09□□□□□ -1.6
HMGB3P6-201ENST00000444896 WIZO95785 1651 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SPATA31A5Q5VU36 1347 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SPATA31A7Q8IWB4 1347 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 MASP2O00187 686 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 TK1P04183 234 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 ENO1P06733 434 aaKnown RBP5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 PDCLQ13371 301 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 RAPGEF1Q13905 1077 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 CEP78Q5JTW2 689 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 FBXO47Q5MNV8 452 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 CC2D1BQ5T0F9 858 aaKnown RBP5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SYCE2Q6PIF2 218 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 CYP26C1Q6V0L0 522 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 PTF1AQ7RTS3 328 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 ANKS1BQ7Z6G8 1248 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 ADGRF3Q8IZF5 1079 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SRFBP1Q8NEF9 429 aaKnown RBP5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 MAP4K1Q92918 833 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 GCC1Q96CN9 775 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SENP7Q9BQF6 1050 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 HERC2P3Q9BVR0 1158 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 CHODLQ9H9P2 273 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 SMARCA4P51532 1647 aa5.08□□□□□ -1.6
HMGB3P6-201ENST00000444896 CGB1A6NKQ9 187 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 C3orf70A6NLC5 250 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 CREB3O43889 395 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 TFRCP02786 760 aaKnown RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 ALDOAP04075 364 aaKnown RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 CKMT1AP12532 417 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 SOX2P48431 317 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 CCT5P48643 541 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 ACTR2P61160 394 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 SLC10A2Q12908 348 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 EFR3AQ14156 821 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 MEX3CQ5U5Q3 659 aaKnown RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 ZNF354CQ86Y25 554 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 SMAP1Q8IYB5 467 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 IGFBPL1Q8WX77 278 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 GOLGA1Q92805 767 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 KTI12Q96EK9 354 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 SFXN1Q9H9B4 322 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 PRDM16Q9HAZ2 1276 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 PLEKHA2Q9HB19 425 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 PDGFCQ9NRA1 345 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 ARL8BQ9NVJ2 186 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 MTMR4Q9NYA4 1195 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 TOP2AP11388 1531 aaKnown RBP5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 LMTK3Q96Q04 1460 aa5.07□□□□□ -1.6
HMGB3P6-201ENST00000444896 WDR17Q8IZU2 1322 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms