RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CCR1P32246 355 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 MSH2P43246 934 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 SLC11A1P49279 550 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 ZNF33AQ06730 810 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 GALNT2Q10471 571 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 WASHC5Q12768 1159 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 MSANTD2Q6P1R3 559 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 CCDC33Q8N5R6 958 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 TET1Q8NFU7 2136 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 HDAC11Q96DB2 347 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 SERPINB11Q96P15 392 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 PAFAH2Q99487 392 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 SSU72Q9NP77 194 aaKnown RBP19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 COMMD8Q9NX08 183 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 IL37Q9NZH6 218 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 PRDM4Q9UKN5 801 aa19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 SMG5Q9UPR3 1016 aaKnown RBP19.42■□□□□ 0.7
SEMA3D-202ENST00000444867 CENPFP49454 3210 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 CCL5P13501 91 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 CREB1P16220 341 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 EPHB2P29323 1055 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 COG7P83436 770 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 IFRD2Q12894 506 aaPredicted RBP19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 FUT10Q6P4F1 479 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 DENND5BQ6ZUT9 1274 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 MICALCLQ6ZW33 695 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 ZNF534Q76KX8 674 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 SPPL2BQ8TCT7 592 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 SGSM3Q96HU1 749 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 ZNF317Q96PQ6 595 aaPredicted RBP19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 SMC6Q96SB8 1091 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 PRMT1Q99873 361 aaKnown RBP19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 GPR62Q9BZJ7 368 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 TRABDQ9H4I3 376 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 ZC3H7BQ9UGR2 993 aaKnown RBP19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 HTTP42858 3142 aa19.41■□□□□ 0.7
SEMA3D-202ENST00000444867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 TCRBV9S1A1TA0A576 114 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM47DPA6NHR8 397 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 FGF10O15520 208 aaPredicted RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 AVILO75366 819 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 RTN3O95197 1032 aaPredicted RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 CPP00450 1065 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 DRD4P21917 467 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 HOXC13P31276 330 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 NRG1Q02297 640 aaPredicted RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 PKN2Q16513 984 aaKnown RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 SYCP2LQ5T4T6 812 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 CEP57Q86XR8 500 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 ZNF567Q8N184 647 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 AGGF1Q8N302 714 aaeCLIP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 LRRC43Q8N309 656 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 C2orf15Q8WU43 125 aaKnown RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 DCAKDQ8WVC6 231 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 DYDC1Q8WWB3 177 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 CASP10Q92851 521 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 SIGLEC10Q96LC7 697 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 VAT1Q99536 393 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 HIPK3Q9H422 1215 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 A0A1W2PQH9 124 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM92AA1XBS5 289 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 GALTP07902 379 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 GATMP50440 423 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 PPARDQ03181 441 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 GPR17Q13304 367 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 MTFR1Q15390 333 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 TCTN1Q2MV58 587 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 LRRC8BQ6P9F7 803 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 CPLX4Q7Z7G2 160 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 SLC44A1Q8WWI5 657 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 TOX2Q96NM4 488 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 EBNA1BP2Q99848 306 aaKnown RBP19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 FAM107BQ9H098 131 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 RNF208Q9H0X6 261 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 NMUR1Q9HB89 426 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 TRHDEQ9UKU6 1024 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 TTLL3Q9Y4R7 772 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 IKBKGQ9Y6K9 419 aa19.4■□□□□ 0.7
SEMA3D-202ENST00000444867 GREB1Q4ZG55 1949 aa19.39■□□□□ 0.7
SEMA3D-202ENST00000444867 ATXN2Q99700 1313 aaKnown RBP19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 IQANK1A0A1B0GTG1 560 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 TBKBP1A7MCY6 615 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 TBC1D4O60343 1298 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 SLC2A3P11169 496 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 GARSP41250 739 aaKnown RBP19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 PSEN1P49768 467 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 MTM1Q13496 603 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 DDR2Q16832 855 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 MANEALQ5VSG8 457 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 SLC39A5Q6ZMH5 540 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 ANKS3Q6ZW76 656 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 CCNJLQ8IV13 435 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 LZTR1Q8N653 840 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 NPWQ8N729 165 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 ANKRD42Q8N9B4 389 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 CKAP2Q8WWK9 683 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 ALKBH8Q96BT7 664 aaKnown RBP19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 SPATA17Q96L03 361 aa19.39■□□□□ 0.69
SEMA3D-202ENST00000444867 NSRP1Q9H0G5 558 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms