RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KLHL4Q9C0H6 718 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 WNT8AQ9H1J5 351 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 NRBP2Q9NSY0 501 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 SH3BP4Q9P0V3 963 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 DKK4Q9UBT3 224 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 DAPP1Q9UN19 280 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 CARMIL1Q5VZK9 1371 aa4.1□□□□□ -1.75
UBR3-206ENST00000444475 A0A1W2PQM1 296 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SLC15A5A6NIM6 579 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ZNF716A6NP11 495 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 RNF225M0QZC1 329 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 RHBDL1O75783 438 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ACTL6BO94805 426 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 FTLP02792 175 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 NTRK1P04629 796 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PFKMP08237 780 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 VIMP08670 466 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 ZNF735P0CB33 412 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ESRRAP11474 423 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 ETV3P41162 512 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SLC5A3P53794 718 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 NAGLUP54802 743 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 GSTO1P78417 241 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 DHX9Q08211 1270 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 NEK5Q6P3R8 708 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TADA2BQ86TJ2 420 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 WDR63Q8IWG1 891 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 OXR1Q8N573 874 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 KDM1BQ8NB78 822 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 OR8K5Q8NH50 307 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 IQCDQ96DY2 449 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ZSCAN5AQ9BUG6 496 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TSGA10Q9BZW7 698 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 DPH5Q9H2P9 285 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ARMT1Q9H993 441 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SPACA1Q9HBV2 294 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.09□□□□□ -1.75
UBR3-206ENST00000444475 MRPL15Q9P015 296 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 CFAP97Q9P2B7 532 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 LEF1Q9UJU2 399 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 MTO1Q9Y2Z2 717 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 CGNL1Q0VF96 1302 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PLEKHG2Q9H7P9 1386 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 A0A1W2PN81 502 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 FAM90A20PA6NIJ5 464 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 NOP56O00567 594 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 SCAF4O95104 1147 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 GNA14O95837 355 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 MT-ND5P03915 603 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ADH1AP07327 375 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PRKAR1AP10644 381 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 HOXB1P14653 301 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 PTPN6P29350 595 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TRHRP34981 398 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 CHRNA7P36544 502 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TXKP42681 527 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PTGIRP43119 386 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 POU3F4P49335 361 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 FLT3LGP49771 235 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SLC16A1P53985 500 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PMS2P54278 862 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 MAP3K7CLP57077 242 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 KIAA1024LP59773 190 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 DSTNP60981 165 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ADAM17P78536 824 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SPIRE1Q08AE8 756 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 DCTN2Q13561 401 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 IL10RAQ13651 578 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ZNF124Q15973 351 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ANKRD20A4Q4UJ75 823 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ANKRD20A8PQ5CZ79 823 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ANKRD20A2Q5SQ80 823 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TRAPPC3LQ5T215 181 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ANKRD20A1Q5TYW2 823 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 ANKRD20A3Q5VUR7 823 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 HDAC11Q96DB2 347 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 PNNQ9H307 717 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 KLC4Q9NSK0 619 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 P4HTMQ9NXG6 502 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 SLC25A10Q9UBX3 287 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 TMEFF2Q9UIK5 374 aaPredicted RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 CAPN11Q9UMQ6 739 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 DERAQ9Y315 318 aa4.09□□□□□ -1.75
UBR3-206ENST00000444475 CFAP20Q9Y6A4 193 aaKnown RBP4.09□□□□□ -1.75
UBR3-206ENST00000444475 PBRM1Q86U86 1689 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 TARSL2A2RTX5 802 aaKnown RBP4.09□□□□□ -1.76
UBR3-206ENST00000444475 DENND3A2RUS2 1198 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 PCDH17O14917 1159 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 CSF2P04141 144 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 NCF1P14598 390 aaPredicted RBP4.09□□□□□ -1.76
UBR3-206ENST00000444475 ATF2P15336 505 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 AHCYP23526 432 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 CTNNA2P26232 953 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 HTR2BP41595 481 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 ARHGAP25P42331 645 aa4.09□□□□□ -1.76
UBR3-206ENST00000444475 CAPZA2P47755 286 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms