RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ANKS1BQ7Z6G8 1248 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 LGI2Q8N0V4 545 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 RPLP0P6Q8NHW5 317 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 WFIKKN2Q8TEU8 576 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 FAM172AQ8WUF8 416 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 CENPIQ92674 756 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 C1orf74Q96LT6 269 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 FAM126AQ9BYI3 521 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-211ENST00000443563 STARD13Q9Y3M8 1113 aa11.21□□□□□ -0.61
HDAC6-211ENST00000443563 GOLGA6L6A8MZA4 724 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 H0Y626 953 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PAGE1O75459 146 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 RNF8O76064 485 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 GJB6O95452 261 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 ADCY5O95622 1261 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 TFE3P19532 575 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 AIF1P55008 147 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SEC13P55735 322 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 RPL7AP62424 266 aaKnown RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SLC12A1Q13621 1099 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 CDH18Q13634 790 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 C15orf59Q2T9L4 293 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 RNF43Q68DV7 783 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SDE2Q6IQ49 451 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 TRNP1Q6NT89 227 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 Q6ZS52 159 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SYT13Q7L8C5 426 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 FAM131BQ86XD5 332 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 MFN1Q8IWA4 741 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 AHI1Q8N157 1196 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 CARNMT1Q8N4J0 409 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF513Q8N8E2 541 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PRSS33Q8NF86 280 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 FIBINQ8TAL6 211 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 USP33Q8TEY7 942 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 RPRD1AQ96P16 312 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PPP1R9BQ96SB3 815 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PRMT1Q99873 361 aaKnown RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SIK2Q9H0K1 926 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 NHEJ1Q9H9Q4 299 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 CALCOCO1Q9P1Z2 691 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 STIM2Q9P246 746 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 MYO1AQ9UBC5 1043 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
HDAC6-211ENST00000443563 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 SLC8A2Q9UPR5 921 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 HS3ST4Q9Y661 456 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
HDAC6-211ENST00000443563 FRYLO94915 3013 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 A0A1B0GVM2 712 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 TCAF2A6NFQ2 919 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 TMEM191CA6NGB0 347 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CCP110O43303 1012 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CLDN11O75508 207 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 LUC7L3O95232 432 aaKnown RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 MOCS3O95396 460 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 HNRNPLP14866 589 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 PSMA2P25787 234 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CDC25BP30305 580 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ADRA1BP35368 520 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 TIE1P35590 1138 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 SGSHP51688 502 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 RPS24P62847 133 aaKnown RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 GFPT1Q06210 699 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 GAS6Q14393 721 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 DMC1Q14565 340 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ACAP1Q15027 740 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 C2orf27AQ580R0 203 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 EOGTQ5NDL2 527 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ZC3H14Q6PJT7 736 aaKnown RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CHST9Q7L1S5 443 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 KIAA0907Q7Z7F0 614 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CAMKK1Q8N5S9 505 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 TC2NQ8N9U0 490 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 CTNNBL1Q8WYA6 563 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 EZH1Q92800 747 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 NTAN1Q96AB6 310 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 RETREG1Q9H6L5 497 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ABCB8Q9NUT2 735 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 KIAA1522Q9P206 1035 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-211ENST00000443563 IMPACTQ9P2X3 320 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 GGA2Q9UJY4 613 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
HDAC6-211ENST00000443563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 H0Y858 1186 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 TRIM24O15164 1050 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 KLF8O95600 359 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-211ENST00000443563 CYP1A2P05177 515 aa11.18□□□□□ -0.62
HDAC6-211ENST00000443563 ATP5BP06576 529 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms