RNA–Protein interactions for RNA: ENST00000443247.1

AC003001.1-201, humanhuman

TSL 5 BASIC

Gene AC003001.1, Length 1,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003001.1-201ENST00000443247 UGDHO60701 494 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 SKAP2O75563 359 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 CNTN5O94779 1100 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ALDOAP04075 364 aaKnown RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 TMEM191BP0C7N4 346 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 GRK5P34947 590 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 FAM3BP58499 235 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 RPL15P61313 204 aaKnown RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 RNASELQ05823 741 aaKnown RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 SRSF1Q07955 248 aaKnown RBP eCLIP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 SF3A3Q12874 501 aaKnown RBP eCLIP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ZNF474Q6S9Z5 364 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ZNF366Q8N895 744 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ARL14EPQ8N8R7 260 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ZBTB9Q96C00 473 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ZFYVE19Q96K21 471 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 MECRQ9BV79 373 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 ERVK-5Q9HDB9 667 aa4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 PAPOLBQ9NRJ5 636 aaKnown RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 TRPC5Q9UL62 973 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 TTBK1Q5TCY1 1321 aaPredicted RBP4.93□□□□□ -1.62
AC003001.1-201ENST00000443247 SGPL1O95470 568 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 GYS1P13807 737 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 PDIA3P30101 505 aaKnown RBP4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 ME1P48163 572 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 CCT4P50991 539 aaKnown RBP4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 SHC2P98077 582 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 B4GALNT1Q00973 533 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 TLE3Q04726 772 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 PTK2BQ14289 1009 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 PGM5Q15124 567 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 PFKFB4Q16877 469 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 C1orf228Q6PIY5 440 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 IRF2BP2Q7Z5L9 587 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 TECPR1Q7Z6L1 1165 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 ARFGAP1Q8N6T3 406 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 ADPRHL1Q8NDY3 354 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 OR1N1Q8NGS0 311 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 TUBB6Q9BUF5 446 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 KATNAL1Q9BW62 490 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 SLC12A4Q9UP95 1085 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 SLC8A2Q9UPR5 921 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 CNTN6Q9UQ52 1028 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 ZBTB1Q9Y2K1 713 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 DAAM1Q9Y4D1 1078 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 HS3ST3B1Q9Y662 390 aa4.92□□□□□ -1.62
AC003001.1-201ENST00000443247 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 SLC38A8A6NNN8 435 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 SYT5O00445 386 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 TRIM38O00635 465 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ALDOCP09972 364 aaKnown RBP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 TGM2P21980 687 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 FOXL2P58012 376 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 GALNT1Q10472 559 aaPredicted RBP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 PUM3Q15397 648 aaKnown RBP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ZACNQ401N2 412 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ZNF569Q5MCW4 686 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ADGRF3Q8IZF5 1079 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ATG16L2Q8NAA4 619 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 VPS37AQ8NEZ2 397 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 OR52N4Q8NGI2 321 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 HMGB4Q8WW32 186 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 ZNF347Q96SE7 839 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 MPHOSPH6Q99547 160 aaKnown RBP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 PIMREGQ9BSJ6 248 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 PLCB1Q9NQ66 1216 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 POT1Q9NUX5 634 aa4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.91□□□□□ -1.62
AC003001.1-201ENST00000443247 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TRBV5-3A0A0A0MS03 114 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A18PA6NE21 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A16PA6NEW6 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A9PA6NNJ1 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A5PA8MXJ8 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3LB9A6J9 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 ITGA2BP08514 1039 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A15PP0C7V4 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM90A14PP0C7W9 464 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3HP0C7X1 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 IGFBP2P18065 325 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 KRTAP10-9P60411 292 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 RBM6P78332 1123 aaKnown RBP4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 ICA1Q05084 483 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 MIDNQ504T8 468 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3GQ6DHY5 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3CQ6IPX1 549 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 LRIG3Q6UXM1 1119 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 TBC1D3Q8IZP1 549 aaPredicted RBP4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 FAM47BQ8NA70 645 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 SLC44A5Q8NCS7 719 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
AC003001.1-201ENST00000443247 SLC39A13Q96H72 371 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms