RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LMLNQ96KR4 655 aa22.93■■□□□ 1.26
HDLBP-220ENST00000442730 STIM2Q9P246 746 aa22.93■■□□□ 1.26
HDLBP-220ENST00000442730 SYNJ2BP-COX16A0A087WUM0 186 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 BCLAF3A2AJT9 711 aaKnown RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 TYW5A2RUC4 315 aaKnown RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ZBTB24O43167 697 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 FOXD2O60548 495 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ZNF806P0C7X5 589 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SLC2A3P11169 496 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 TACR2P21452 398 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 CCR1P32246 355 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SCNN1AP37088 669 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 NOMO3P69849 1222 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 CREB5Q02930 508 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 UBXN1Q04323 297 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SF3A2Q15428 464 aaKnown RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SERPINA13PQ6UXR4 307 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ERICH1Q86X53 443 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ZNF677Q86XU0 584 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 XYLT1Q86Y38 959 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 DHX40Q8IX18 779 aaKnown RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 LGI2Q8N0V4 545 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 CFAP52Q8N1V2 620 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ZNF557Q8N988 423 aaPredicted RBP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 FIBINQ8TAL6 211 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 C18orf8Q96DM3 657 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ERGIC2Q96RQ1 377 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 ADAM33Q9BZ11 813 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SMOC1Q9H4F8 434 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.92■■□□□ 1.26
HDLBP-220ENST00000442730 COX16Q9P0S2 106 aa22.92■■□□□ 1.26
HDLBP-220ENST00000442730 CHRNB2P17787 502 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 NOS2P35228 1153 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 MATKP42679 507 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 CDR2Q01850 454 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 ARID5AQ03989 594 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 PTPRNQ16849 979 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 NAA35Q5VZE5 725 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 MBLAC2Q68D91 279 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 ATP6V0D2Q8N8Y2 350 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 NEK11Q8NG66 645 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 CYB5D2Q8WUJ1 264 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 PCMTD1Q96MG8 357 aaPredicted RBP22.91■■□□□ 1.26
HDLBP-220ENST00000442730 SPAG5Q96R06 1193 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 PRMT1Q99873 361 aaKnown RBP22.91■■□□□ 1.26
HDLBP-220ENST00000442730 VPS45Q9NRW7 570 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 CDV3Q9UKY7 258 aaKnown RBP22.91■■□□□ 1.26
HDLBP-220ENST00000442730 ABCA7Q8IZY2 2146 aa22.91■■□□□ 1.26
HDLBP-220ENST00000442730 MAP3K13O43283 966 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 ZNF217O75362 1048 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 LUC7L3O95232 432 aaKnown RBP22.9■■□□□ 1.26
HDLBP-220ENST00000442730 ABCB4P21439 1286 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 STAT1P42224 750 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 FMO1Q01740 532 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 LMAN2Q12907 356 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 NME3Q13232 169 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 CDH18Q13634 790 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 PUM1Q14671 1186 aaKnown RBP eCLIP22.9■■□□□ 1.26
HDLBP-220ENST00000442730 FNDC3BQ53EP0 1204 aaKnown RBP22.9■■□□□ 1.26
HDLBP-220ENST00000442730 C2CD6Q53TS8 623 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 FAM102AQ5T9C2 384 aaPredicted RBP22.9■■□□□ 1.26
HDLBP-220ENST00000442730 LPCAT2Q7L5N7 544 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 CARNMT1Q8N4J0 409 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 NETO1Q8TDF5 533 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 CPA5Q8WXQ8 436 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 NPY6RQ99463 290 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 MKRN2Q9H000 416 aaKnown RBP22.9■■□□□ 1.26
HDLBP-220ENST00000442730 TMEM245Q9H330 911 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 CD93Q9NPY3 652 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 CKAP5Q14008 2032 aa22.9■■□□□ 1.26
HDLBP-220ENST00000442730 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 IGHV1OR15-9A0A0B4J2B8 117 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 F5H5T6 163 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 M0QYT0 321 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 GDF9O60383 454 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 SYNCRIPO60506 623 aaKnown RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 CYP1A1P04798 512 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 EPHX1P07099 455 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 DLDP09622 509 aaKnown RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 HLA-EP13747 358 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 TFE3P19532 575 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 PTGER3P43115 390 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 DHPSP49366 369 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 RNASE9P60153 205 aaKnown RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 SKOR2Q2VWA4 1001 aaPredicted RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 FSCBQ5H9T9 825 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 TCEAL6Q6IPX3 200 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 KIAA1324Q6UXG2 1013 aaKnown RBP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 CYP2U1Q7Z449 544 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 TMEFF1Q8IYR6 380 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 MSANTD4Q8NCY6 345 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 TCEAL3Q969E4 200 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 RNF34Q969K3 372 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 NT5C3BQ969T7 300 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 FUCA2Q9BTY2 467 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 PIGVQ9NUD9 493 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 RRN3Q9NYV6 651 aa22.89■■□□□ 1.25
HDLBP-220ENST00000442730 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.89■■□□□ 1.25
HDLBP-220ENST00000442730 SLC12A6Q9UHW9 1150 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms