RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GRIK2Q13002 908 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 CAMK2GQ13555 558 aaPredicted RBP12.23□□□□□ -0.45
TTC28-203ENST00000442232 MEA1Q16626 185 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 PIK3R6Q5UE93 754 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 ZNF776Q68DI1 518 aaPredicted RBP12.23□□□□□ -0.45
TTC28-203ENST00000442232 IL27RAQ6UWB1 636 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 CARNMT1Q8N4J0 409 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 ZNF366Q8N895 744 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 OR2I1PQ8NGU4 316 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 LMO3Q8TAP4 145 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
TTC28-203ENST00000442232 CLEC4CQ8WTT0 213 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 DNASE2BQ8WZ79 361 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 AZIN2Q96A70 460 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 UBE2TQ9NPD8 197 aaPredicted RBP12.23□□□□□ -0.45
TTC28-203ENST00000442232 TJP2Q9UDY2 1190 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 NCKAP1Q9Y2A7 1128 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
TTC28-203ENST00000442232 NYNRINQ9P2P1 1898 aaKnown RBP12.23□□□□□ -0.45
TTC28-203ENST00000442232 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 METTL12A8MUP2 240 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 BCAT2O15382 392 aaPredicted RBP12.22□□□□□ -0.45
TTC28-203ENST00000442232 CALCAP01258 141 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 SPINK2P20155 84 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 CD70P32970 193 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 USP8P40818 1118 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 MATKP42679 507 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 SGSHP51688 502 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 TEAD4Q15561 434 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
TTC28-203ENST00000442232 ZNF423Q2M1K9 1284 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 FAM133BQ5BKY9 247 aaKnown RBP12.22□□□□□ -0.45
TTC28-203ENST00000442232 RNF219Q5W0B1 726 aaPredicted RBP12.22□□□□□ -0.45
TTC28-203ENST00000442232 ADIPOR2Q86V24 386 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 NAXDQ8IW45 347 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 GANCQ8TET4 914 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 MED15Q96RN5 788 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 ZSWIM1Q9BR11 485 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 BTBD1Q9H0C5 482 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 TMEM245Q9H330 911 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 SLC12A6Q9UHW9 1150 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 EIF2B4Q9UI10 523 aaKnown RBP12.22□□□□□ -0.45
TTC28-203ENST00000442232 NEUROG3Q9Y4Z2 214 aa12.22□□□□□ -0.45
TTC28-203ENST00000442232 C1QTNF9BB2RNN3 333 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 HYAL3O43820 417 aaPredicted RBP12.21□□□□□ -0.45
TTC28-203ENST00000442232 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.45
TTC28-203ENST00000442232 SEMA4FO95754 770 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 C1QTNF9P0C862 333 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 CD59P13987 128 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 BMP6P22004 513 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 SLC6A4P31645 630 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 AFF3P51826 1226 aaKnown RBP12.21□□□□□ -0.45
TTC28-203ENST00000442232 SNX16P57768 344 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 DENND1BQ6P3S1 775 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 LRSAM1Q6UWE0 723 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 KIAA0907Q7Z7F0 614 aaPredicted RBP12.21□□□□□ -0.45
TTC28-203ENST00000442232 CHSY1Q86X52 802 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 ATP6V0D2Q8N8Y2 350 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 FIBINQ8TAL6 211 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 FCRL2Q96LA5 508 aaPredicted RBP12.21□□□□□ -0.45
TTC28-203ENST00000442232 KREMEN1Q96MU8 473 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 NOX5Q96PH1 765 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 POPDC2Q9HBU9 364 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 SGK2Q9HBY8 427 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 NAALADL1Q9UQQ1 740 aa12.21□□□□□ -0.45
TTC28-203ENST00000442232 TP53BP1Q12888 1972 aaPredicted RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 E5RJQ4 531 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 F5H5T6 163 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 SH3BP5O60239 455 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 SLC2A3P11169 496 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 NNMTP40261 264 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 CSKP41240 450 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 GPD2P43304 727 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 RPS14P62263 151 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 TRIP6Q15654 476 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 ARHGAP44Q17R89 818 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 MS4A13Q5J8X5 152 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 NADSYN1Q6IA69 706 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 BEND5Q7L4P6 421 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 ADAT2Q7Z6V5 191 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 TAC4Q86UU9 113 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 LGI2Q8N0V4 545 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 WFDC5Q8TCV5 224 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 SETD7Q8WTS6 366 aaKnown RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 RNF34Q969K3 372 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 BTN2A3PQ96KV6 586 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 PRICKLE1Q96MT3 831 aaPredicted RBP12.2□□□□□ -0.46
TTC28-203ENST00000442232 CRACR2AQ9BSW2 395 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 GAREM1Q9H706 876 aa12.2□□□□□ -0.46
TTC28-203ENST00000442232 PRSS16Q9NQE7 514 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms