RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 NCAM1P13591 858 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 HOXC13P31276 330 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PTGER3P43115 390 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MAPK8P45983 427 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 BPIFB4P59827 614 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CCDC15Q0P6D6 951 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MORC3Q14149 939 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 EFHC1Q5JVL4 640 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TCEAL6Q6IPX3 200 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CHST9Q7L1S5 443 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD44-211ENST00000442151 ATP6V0D2Q8N8Y2 350 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 RBBP8NLQ8NC74 664 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 DNASE2BQ8WZ79 361 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 BHMTQ93088 406 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TCEAL3Q969E4 200 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 HSPA12BQ96MM6 686 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SRRTQ9BXP5 876 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 MIS12Q9H081 205 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 LHX5Q9H2C1 402 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 THAP9Q9H5L6 903 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SGK2Q9HBY8 427 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 RXFP3Q9NSD7 469 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 DNAAF2Q9NVR5 837 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 KIAA1522Q9P206 1035 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 USP36Q9P275 1121 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TLR6Q9Y2C9 796 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CEP83Q9Y592 693 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PCDHB3Q9Y5E6 796 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 GPR179Q6PRD1 2367 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 YJEFN3A6XGL0 299 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 E7ENQ6 273 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TBL1XO60907 577 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PROS1P07225 676 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SRPRAP08240 638 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 DLDP09622 509 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 ZNF883P0CG24 379 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 GMPRP36959 345 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 IL12RB1P42701 662 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PTK2Q05397 1052 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SULT2A1Q06520 285 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 FOXC1Q12948 553 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SEMA3BQ13214 749 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CAMK2GQ13555 558 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 GEN1Q17RS7 908 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 INAVAQ3KP66 663 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 FUT11Q495W5 492 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CT47A1Q5JQC4 288 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 RNF219Q5W0B1 726 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 ISM2Q6H9L7 571 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TTI2Q6NXR4 508 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 GBP6Q6ZN66 633 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 KIAA0907Q7Z7F0 614 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 SFTPA1Q8IWL2 248 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TRIM59Q8IWR1 403 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MINDY1Q8N5J2 469 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 UBR7Q8N806 425 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MLKLQ8NB16 471 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 FIBINQ8TAL6 211 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 EDEM1Q92611 657 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 TOE1Q96GM8 510 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 ACOX2Q99424 681 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CDC6Q99741 560 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 BTBD1Q9H0C5 482 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CAPN10Q9HC96 672 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 UBE2TQ9NPD8 197 aaPredicted RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 OSGEPQ9NPF4 335 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 ST7Q9NRC1 585 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
CD44-211ENST00000442151 RRN3Q9NYV6 651 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 SFMBT1Q9UHJ3 866 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 CTNND2Q9UQB3 1225 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 APOBEC2Q9Y235 224 aaKnown RBP8.08□□□□□ -1.12
CD44-211ENST00000442151 PAXBP1Q9Y5B6 917 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 PCDHGB2Q9Y5G2 931 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MYO16Q9Y6X6 1858 aa8.08□□□□□ -1.12
CD44-211ENST00000442151 MYOFQ9NZM1 2061 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 CACNA1BQ00975 2339 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 CEP250Q9BV73 2442 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TRIM49BA6NDI0 452 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 PATE3B3GLJ2 98 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TRIM24O15164 1050 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 BCAT2O15382 392 aaPredicted RBP8.07□□□□□ -1.12
CD44-211ENST00000442151 TSPAN3O60637 253 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TPM2P07951 284 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 RGS7P49802 495 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 TPMTP51580 245 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
CD44-211ENST00000442151 PRSS12P56730 875 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 UBE2HP62256 183 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 CDK17Q00537 523 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 MESP2Q0VG99 397 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 SLC45A4Q5BKX6 768 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 PIK3R6Q5UE93 754 aa8.07□□□□□ -1.12
CD44-211ENST00000442151 MBLAC2Q68D91 279 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms