RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SPXQ9BT56 116 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 COPS7BQ9H9Q2 264 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SAYSD1Q9NPB0 183 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 STK32BQ9NY57 414 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 COL20A1Q9P218 1284 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SCOCQ9UIL1 159 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AURKCQ9UQB9 309 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PCDHGA1Q9Y5H4 931 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CAPN6Q9Y6Q1 641 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RGPD1P0DJD0 1748 aa6.11□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ANKARQ7Z5J8 1434 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KIF24Q5T7B8 1368 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EFCAB8A8MWE9 144 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 H3BQF6 201 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ST8SIA5O15466 376 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PTP4A3O75365 173 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SEC31AO94979 1220 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PRLP01236 227 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FESP07332 822 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 DLDP09622 509 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HSPA8P11142 646 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MYL4P12829 197 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ADSLP30566 484 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SLC16A2P36021 539 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 DPP6P42658 865 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HTRA4P83105 476 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SLC6A3Q01959 620 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MGAT2Q10469 447 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PKP1Q13835 747 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GALNT3Q14435 633 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 DLGAP5Q15398 846 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TDRD12Q587J7 1177 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 STEAP3Q658P3 488 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SLFN12LQ6IEE8 588 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CLEC2AQ6UVW9 174 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 C1orf229Q6ZS94 237 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PRPF39Q86UA1 669 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RIOX2Q8IUF8 465 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CCDC50Q8IVM0 306 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ADGRG2Q8IZP9 1017 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CEP112Q8N8E3 955 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 NIPA2Q8N8Q9 360 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LINS1Q8NG48 757 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 OR2I1PQ8NGU4 316 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 BTBD6Q96KE9 485 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KCNC2Q96PR1 638 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 LENG8Q96PV6 779 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RUFY1Q96T51 708 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FUT8Q9BYC5 575 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TDP1Q9NUW8 608 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 VPS18Q9P253 973 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 BAG5Q9UL15 447 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ZMYND8Q9ULU4 1186 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PCDHA6Q9UN73 950 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TMEM5Q9Y2B1 443 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ASB1Q9Y576 335 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RIMS1Q86UR5 1692 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 XRN1Q8IZH2 1706 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 A0A0A0MRY4 1105 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ACOD1A6NK06 481 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FAM171A2A8MVW0 826 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 H0YAE9 185 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GOLGA8SH3BPF8 625 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TAF4O00268 1085 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MAP2K7O14733 419 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SULT1B1O43704 296 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SLC25A17O43808 307 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GJB3O75712 270 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TNFRSF6BO95407 300 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ANXA2P07355 339 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TMIGD3P0DMS9 266 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EZRP15311 586 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EN2P19622 333 aaPredicted RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AMPD1P23109 780 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ACAT1P24752 427 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 CTNNA2P26232 953 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 AOAHP28039 575 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 EEF1DP29692 281 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 RANBP1P43487 201 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 HERVK_113P62684 666 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ROM1Q03395 351 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 BYSLQ13895 437 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KHDC1Q4VXA5 237 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 TOR1AIP1Q5JTV8 583 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 MAP3K21Q5TCX8 1036 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FYB2Q5VWT5 728 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 WDR93Q6P2C0 686 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 FAM180AQ6UWF9 173 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 SEZ6L2Q6UXD5 910 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 KANSL1Q7Z3B3 1105 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 ARHGAP22Q7Z5H3 698 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 R3HCC1LQ7Z5L2 792 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 PALM2Q8IXS6 379 aa6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 GPR161Q8N6U8 529 aaKnown RBP6.1□□□□□ -1.43
ALMS1-IT1-201ENST00000441587 C7orf57Q8NEG2 295 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms