RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CDHR1Q96JP9 859 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 ST6GALNAC4Q9H4F1 302 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A7Q9HAW7 530 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A10Q9HAW8 530 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A8Q9HAW9 530 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 CXorf49A8MYA2 514 aaPredicted RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 J3QRK9 145 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 PSMD12O00232 456 aaPredicted RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 BPGMP07738 259 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 TNNI1P19237 187 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 UBA1P22314 1058 aaKnown RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 ALDH3B2P48448 385 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 RPL7AP62424 266 aaKnown RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 C12orf56Q8IXR9 622 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 CATSPER1Q8NEC5 780 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 BORCS5Q969J3 196 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 C12orf43Q96C57 262 aaKnown RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 FBXL8Q96CD0 374 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
PMS1-213ENST00000441310 THAP1Q9NVV9 213 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 ARHGAP26Q9UNA1 814 aa17.25■□□□□ 0.35
PMS1-213ENST00000441310 KRT37O76014 449 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 ITGAVP06756 1048 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 SNRPAP09012 282 aaKnown RBP17.24■□□□□ 0.35
PMS1-213ENST00000441310 RPL10AP62906 217 aaKnown RBP17.24■□□□□ 0.35
PMS1-213ENST00000441310 SEPT6Q14141 434 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 SCARA3Q6AZY7 606 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 NANOGP8Q6NSW7 305 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 SLC26A11Q86WA9 606 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 ADCY4Q8NFM4 1077 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 AGAP3Q96P47 875 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 PNPOQ9NVS9 261 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 IGSF9Q9P2J2 1179 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 PADI4Q9UM07 663 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 CDC14AQ9UNH5 594 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 CFLARO15519 480 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 KRT80Q6KB66 452 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 C16orf46Q6P387 395 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 ACTL9Q8TC94 416 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 ISOC1Q96CN7 298 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
PMS1-213ENST00000441310 SPATC1LQ9H0A9 340 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 CENPFP49454 3210 aa17.24■□□□□ 0.35
PMS1-213ENST00000441310 E7ESA3 106 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 CD1EP15812 388 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 EPHA3P29320 983 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 NLRP11P59045 1033 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 OTUD4Q01804 1114 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 CYP24A1Q07973 514 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 BCL2A1Q16548 175 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 MON1BQ7L1V2 547 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 TRIM11Q96F44 468 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 SEMA6AQ9H2E6 1030 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 TXNRD2Q9NNW7 524 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 CROTQ9UKG9 612 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 CROCCQ5TZA2 2017 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 H6PDO95479 791 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 COX4I1P13073 169 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 PKNOX1P55347 436 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 Q3C1V9 767 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 EGFLAMQ63HQ2 1017 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 IFNLR1Q8IU57 520 aaPredicted RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 TICAM1Q8IUC6 712 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 GPD1LQ8N335 351 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 FBXL13Q8NEE6 735 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 NKD2Q969F2 451 aaPredicted RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 hCG_1818297A0A087WSY0 165 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 K7ERI5 159 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 CAPN15O75808 1086 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 ATP5BP06576 529 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 CTBSQ01459 385 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 FASTKD1Q53R41 847 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 MROH9Q5TGP6 573 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 METTL21CQ5VZV1 264 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 MAVSQ7Z434 540 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 GPR141Q7Z602 305 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 ZNF516Q92618 1163 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 EME1Q96AY2 570 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 SLC2A11Q9BYW1 496 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 TUBA8Q9NY65 449 aaPredicted RBP17.23■□□□□ 0.35
PMS1-213ENST00000441310 HESX1Q9UBX0 185 aa17.23■□□□□ 0.35
PMS1-213ENST00000441310 F8VP50 259 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 RFPL1O75677 317 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 ZNF12P17014 697 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A6P19224 532 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A1P22309 533 aa17.22■□□□□ 0.35
PMS1-213ENST00000441310 UGT1A4P22310 534 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms