RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 RP9Q8TA86 221 aaKnown RBP6.83□□□□□ -1.32
USP46-201ENST00000441222 REEP1Q9H902 201 aa6.83□□□□□ -1.32
USP46-201ENST00000441222 POLD4Q9HCU8 107 aa6.83□□□□□ -1.32
USP46-201ENST00000441222 ITGA11Q9UKX5 1188 aa6.83□□□□□ -1.32
USP46-201ENST00000441222 IRAK3Q9Y616 596 aa6.83□□□□□ -1.32
USP46-201ENST00000441222 GLI2P10070 1586 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 HACD1B0YJ81 288 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 INPP4BO15327 924 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TLX1P31314 330 aaPredicted RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 SLC1A6P48664 564 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FXR1P51114 621 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP46-201ENST00000441222 RHOAP61586 193 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 RPL19P84098 196 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 CDK16Q00536 496 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FIGNQ5HY92 759 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SCARA3Q6AZY7 606 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 KYAT3Q6YP21 454 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 FAM20CQ8IXL6 584 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CARNMT1Q8N4J0 409 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FNDC5Q8NAU1 212 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MYCBPAPQ8TBZ2 947 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CELF4Q9BZC1 486 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 CEP170Q5SW79 1584 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MROH7Q68CQ1 1323 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 A0A087X1B8 175 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 C1orf232A0A0U1RR37 186 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CKBP12277 381 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ACO1P21399 889 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 CPA2P48052 419 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 GTF2A2P52657 109 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 LGALS3BPQ08380 585 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FBXO39Q8N4B4 442 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ZNF513Q8N8E2 541 aaPredicted RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 ZNF248Q8NDW4 579 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CELF1Q92879 486 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 C6orf62Q9GZU0 229 aaPredicted RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 IQGAP3Q86VI3 1631 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 USP42Q9H9J4 1324 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 ZBTB14O43829 449 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ATP9AO75110 1047 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MAPTP10636 758 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 SLC2A4P14672 509 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 NPR3P17342 541 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FGFR2P21802 821 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CCT3P49368 545 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 AQP5P55064 265 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 C1QBPQ07021 282 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 FASTKQ14296 549 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 ZNHIT3Q15649 155 aaPredicted RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 ERMARDQ5T6L9 678 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 DHFR2Q86XF0 187 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CCDC185Q8N715 623 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FBXO36Q8NEA4 188 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PJA1Q8NG27 643 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SLC38A2Q96QD8 506 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CLCC1Q96S66 551 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SAR1AQ9NR31 198 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 KLHL1Q9NR64 748 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 DNAJC16Q9Y2G8 782 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 AXIN2Q9Y2T1 843 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 LOC102724159A0A0B4J2E5 919 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 USP27XA6NNY8 438 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TEX46H3BTG2 121 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 QSOX1O00391 747 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PCDH8O95206 1070 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 NUDT14O95848 222 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TFRCP02786 760 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 ALDH2P05091 517 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 IGKV5-2P06315 115 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 THPOP40225 353 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 EIF2B2P49770 351 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 RAB27AP51159 221 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MYL6P60660 151 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CDH17Q12864 832 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 PWP2Q15269 919 aaKnown RBP6.82□□□□□ -1.32
USP46-201ENST00000441222 WDR49Q8IV35 697 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 FAM126BQ8IXS8 530 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 CHPFQ8IZ52 775 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TPD52L3Q96J77 140 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SLC39A8Q9C0K1 460 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 KCNH7Q9NS40 1196 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 URADA6NGE7 173 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 F8VZ95 297 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 C2CD2LO14523 706 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 SERPINE1P05121 402 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TGFB3P10600 412 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 C21orf59P57076 290 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TMEM62Q0P6H9 643 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 XRCC4Q13426 336 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 LPIN1Q14693 890 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 STX12Q86Y82 276 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 DHRSXQ8N5I4 330 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 TC2NQ8N9U0 490 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 ATP8B4Q8TF62 1192 aa6.82□□□□□ -1.32
USP46-201ENST00000441222 MYLPFQ96A32 169 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms