RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 TFDP2Q14188 446 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 SIX1Q15475 284 aaPredicted RBP10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 MANEALQ5VSG8 457 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 RFX8Q6ZV50 586 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 BBS12Q6ZW61 710 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 Q7L0L9 218 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 GET4Q7L5D6 327 aaPredicted RBP10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 C14orf80Q86SX3 495 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 ZNF683Q8IZ20 524 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 PQLC3Q8N755 202 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 SH3RF2Q8TEC5 729 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 MYLIPQ8WY64 445 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 AP1M1Q9BXS5 423 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 TDP1Q9NUW8 608 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 CFAP97Q9P2B7 532 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 AGO1Q9UL18 857 aaKnown RBP10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 SH3BP1Q9Y3L3 701 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 NR2E1Q9Y466 385 aa10.63□□□□□ -0.71
AP004290.1-201ENST00000440915 E2F8A0AVK6 867 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CTAGE15A4D2H0 777 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 DRGXA6NNA5 263 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 E9PAM4 449 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 APOL1O14791 398 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 DAPK3O43293 454 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 PRAMEF12O95522 483 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 LATS1O95835 1130 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CTAGE8P0CG41 777 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 ZFXP17010 805 aaPredicted RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 ERCC2P18074 760 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 TACR2P21452 398 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 EPHB2P29323 1055 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 HOXC13P31276 330 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 SLC6A4P31645 630 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 HTR7P34969 479 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 C2orf54Q08AI8 447 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 FAM133BQ5BKY9 247 aaKnown RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 SLC9A4Q6AI14 798 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 Q6ZNB5 142 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 HTR3DQ70Z44 454 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CTAGE6Q86UF2 777 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 ARID3BQ8IVW6 561 aaPredicted RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CTAGE4Q8IX94 777 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 NPAS3Q8IXF0 933 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 TTC16Q8NEE8 873 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 MNS1Q8NEH6 495 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 FGF13Q92913 245 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 TBC1D31Q96DN5 1066 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 RIPOR3Q96MK2 946 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 CDX2Q99626 313 aaPredicted RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 PRDM16Q9HAZ2 1276 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 ETNK2Q9NVF9 386 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 STIM2Q9P246 746 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 PPARGC1AQ9UBK2 798 aaKnown RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 STOML2Q9UJZ1 356 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 LSM7Q9UK45 103 aaKnown RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 NEU3Q9UQ49 428 aa10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 HELZP42694 1942 aaKnown RBP10.62□□□□□ -0.71
AP004290.1-201ENST00000440915 IGLV3-10A0A075B6K4 115 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 F5H5T6 163 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 SCAMP3O14828 347 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 DCLK1O15075 740 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 SLU7O95391 586 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 TCF3P15923 654 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 MTHFRP42898 656 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 USP4Q13107 963 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 ZNF77Q15935 545 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 ADGRF1Q5T601 910 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 NCBP2-AS2Q69YL0 99 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RWDD4Q6NW29 188 aaKnown RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 FBXL22Q6P050 247 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RFWD3Q6PCD5 774 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 C1orf228Q6PIY5 440 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 NPNTQ6UXI9 565 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 LRRC31Q6UY01 552 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 LGI2Q8N0V4 545 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 PLD5Q8N7P1 536 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 PRELID2Q8N945 189 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 LRRN4CLQ8ND94 238 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RIN3Q8TB24 985 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 ZSCAN18Q8TBC5 510 aaPredicted RBP10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 IGSF8Q969P0 613 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 HAUS1Q96CS2 278 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 MYEOVQ96EZ4 313 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RPGRIP1Q96KN7 1286 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 GUCD1Q96NT3 240 aa10.61□□□□□ -0.71
AP004290.1-201ENST00000440915 RPRD1AQ96P16 312 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms