RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 SLC2A11Q9BYW1 496 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 IRX2Q9BZI1 471 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 WDCPQ9H6R7 721 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 ARHGEF38Q9NXL2 777 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 ADAMTS1Q9UHI8 967 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 SNX10Q9Y5X0 201 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 HS3ST4Q9Y661 456 aa18.67■□□□□ 0.58
CPSF4-205ENST00000440514 BZW2Q9Y6E2 419 aaKnown RBP18.67■□□□□ 0.58
CPSF4-205ENST00000440514 TYW5A2RUC4 315 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 SIGLEC16A6NMB1 481 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 RTN2O75298 545 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 F9P00740 461 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 TPM1P09493 284 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 GZMAP12544 262 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 HLA-FP30511 346 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 HNRNPH3P31942 346 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 IRAK1P51617 712 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 RPL7AP62424 266 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 MRPS21P82921 87 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 DMC1Q14565 340 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 WDR59Q6PJI9 974 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 NUDT18Q6ZVK8 323 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 SYT13Q7L8C5 426 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 MFN1Q8IWA4 741 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 ZNF513Q8N8E2 541 aaPredicted RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 TXNDC5Q8NBS9 432 aaKnown RBP18.66■□□□□ 0.58
CPSF4-205ENST00000440514 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 VCPIP1Q96JH7 1222 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 HHIPQ96QV1 700 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 PHOX2BQ99453 314 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 ABHD10Q9NUJ1 306 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 ABCB8Q9NUT2 735 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 MMP17Q9ULZ9 603 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 SLC8A2Q9UPR5 921 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 R4GN57 208 aa18.66■□□□□ 0.58
CPSF4-205ENST00000440514 MUC22E2RYF6 1773 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 A0A087X0T9 212 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 SGK1O00141 431 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 CCP110O43303 1012 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 FAM228BP0C875 321 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 WASP42768 502 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ZNF75DP51815 510 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 OGDHQ02218 1023 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 TBX2Q13207 712 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 AUHQ13825 339 aaKnown RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ARID5BQ14865 1188 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ZNF528Q3MIS6 628 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 MPP7Q5T2T1 576 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 HEATR6Q6AI08 1181 aaKnown RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 FBXL22Q6P050 247 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 C14orf80Q86SX3 495 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 VPS36Q86VN1 386 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 CARNMT1Q8N4J0 409 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 OR8K1Q8NGG5 319 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 FAM172AQ8WUF8 416 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 RPRD1AQ96P16 312 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ACOX2Q99424 681 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 SIK2Q9H0K1 926 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ISCUQ9H1K1 167 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 CNOT8Q9UFF9 292 aaKnown RBP18.65■□□□□ 0.58
CPSF4-205ENST00000440514 GGA2Q9UJY4 613 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 VANGL2Q9ULK5 521 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 PAXBP1Q9Y5B6 917 aa18.65■□□□□ 0.58
CPSF4-205ENST00000440514 ANKRD62A6NC57 917 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 ADAM23O75077 832 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 ENDOD1O94919 500 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 LUC7L3O95232 432 aaKnown RBP18.64■□□□□ 0.57
CPSF4-205ENST00000440514 HNRNPLP14866 589 aaKnown RBP eCLIP18.64■□□□□ 0.57
CPSF4-205ENST00000440514 CD70P32970 193 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 EIF4A3P38919 411 aaKnown RBP18.64■□□□□ 0.57
CPSF4-205ENST00000440514 PXNP49023 591 aaPredicted RBP18.64■□□□□ 0.57
CPSF4-205ENST00000440514 HDAC4P56524 1084 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 RABGAP1LQ5R372 815 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 TMEM215Q68D42 235 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 PLEKHA7Q6IQ23 1121 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 DCUN1D2Q6PH85 259 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 STRADAQ7RTN6 431 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.64■□□□□ 0.57
CPSF4-205ENST00000440514 SORCS1Q8WY21 1168 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 IGSF8Q969P0 613 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 CIPCQ9C0C6 399 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 IRF2BPLQ9H1B7 796 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 MYO1AQ9UBC5 1043 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 FANCMQ8IYD8 2048 aa18.64■□□□□ 0.57
CPSF4-205ENST00000440514 PABPC1P11940 636 aaKnown RBP18.63■□□□□ 0.57
CPSF4-205ENST00000440514 FNTBP49356 437 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 ZNF143P52747 638 aaPredicted RBP18.63■□□□□ 0.57
CPSF4-205ENST00000440514 LMAN2Q12907 356 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 MTA1Q13330 715 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 CDH18Q13634 790 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 FUT11Q495W5 492 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 FSCBQ5H9T9 825 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 TMEM92Q6UXU6 159 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 CHST9Q7L1S5 443 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 WFIKKN2Q8TEU8 576 aa18.63■□□□□ 0.57
CPSF4-205ENST00000440514 CENPIQ92674 756 aaPredicted RBP18.63■□□□□ 0.57
CPSF4-205ENST00000440514 NELL1Q92832 810 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms