RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CCDC172P0C7W6 258 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 FLT3P36888 993 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 SULT1E1P49888 294 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 CENPCQ03188 943 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 LAIR1Q6GTX8 287 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 TRNP1Q6NT89 227 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 KIAA0907Q7Z7F0 614 aaPredicted RBP24.48■■□□□ 1.51
VARS-217ENST00000440048 WFIKKN2Q8TEU8 576 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 HMGB4Q8WW32 186 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 SORCS1Q8WY21 1168 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 PRMT1Q99873 361 aaKnown RBP24.48■■□□□ 1.51
VARS-217ENST00000440048 CIPCQ9C0C6 399 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 PIGVQ9NUD9 493 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 SEPT11Q9NVA2 429 aaKnown RBP24.48■■□□□ 1.51
VARS-217ENST00000440048 GGA2Q9UJY4 613 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 STON1Q9Y6Q2 735 aa24.48■■□□□ 1.51
VARS-217ENST00000440048 NPC1O15118 1278 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 TIMM44O43615 452 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 PABPC1P11940 636 aaKnown RBP24.47■■□□□ 1.51
VARS-217ENST00000440048 CD70P32970 193 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 PTP4A2Q12974 167 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 SLC25A52Q3SY17 297 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 KIAA1211LQ6NV74 962 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 CHST9Q7L1S5 443 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 ARCQ7LC44 396 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 PHLDB2Q86SQ0 1253 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 KBTBD6Q86V97 674 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 MFN1Q8IWA4 741 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 FAM160A2Q8N612 972 aaPredicted RBP24.47■■□□□ 1.51
VARS-217ENST00000440048 ZNF557Q8N988 423 aaPredicted RBP24.47■■□□□ 1.51
VARS-217ENST00000440048 FIBINQ8TAL6 211 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 PGAP3Q96FM1 320 aaPredicted RBP24.47■■□□□ 1.51
VARS-217ENST00000440048 TBCBQ99426 244 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 CD248Q9HCU0 757 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 METTL5Q9NRN9 209 aaKnown RBP24.47■■□□□ 1.51
VARS-217ENST00000440048 BCCIPQ9P287 314 aaKnown RBP eCLIP24.47■■□□□ 1.51
VARS-217ENST00000440048 INVSQ9Y283 1065 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 RAD54BQ9Y620 910 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 ABCA7Q8IZY2 2146 aa24.47■■□□□ 1.51
VARS-217ENST00000440048 LRRC53A6NM62 1247 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 F5H5T6 163 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 DCLK1O15075 740 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 IL12RB1P42701 662 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 NSFP46459 744 aaKnown RBP24.46■■□□□ 1.51
VARS-217ENST00000440048 CXCR3P49682 368 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 ENPP2Q13822 863 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 ZNF234Q14588 700 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 USP39Q53GS9 565 aaKnown RBP24.46■■□□□ 1.51
VARS-217ENST00000440048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.46■■□□□ 1.51
VARS-217ENST00000440048 ADIPOR2Q86V24 386 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 PHF13Q86YI8 300 aaPredicted RBP24.46■■□□□ 1.51
VARS-217ENST00000440048 AHI1Q8N157 1196 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 CARNMT1Q8N4J0 409 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 ERLEC1Q96DZ1 483 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 LMLNQ96KR4 655 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 TTYH3Q9C0H2 523 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 ADAM22Q9P0K1 906 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 GMEB2Q9UKD1 530 aa24.46■■□□□ 1.51
VARS-217ENST00000440048 LUC7L3O95232 432 aaKnown RBP24.45■■□□□ 1.5
VARS-217ENST00000440048 F9P00740 461 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 GABRG2P18507 467 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 UBASH3AP57075 661 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 DEUP1Q05D60 604 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 MTA1Q13330 715 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 E2F5Q15329 346 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 PGBD3Q8N328 593 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 OLIG1Q8TAK6 271 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 CFAP57Q96MR6 1250 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 SYT11Q9BT88 431 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 EDEM3Q9BZQ6 932 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 WDCPQ9H6R7 721 aa24.45■■□□□ 1.5
VARS-217ENST00000440048 CKAP5Q14008 2032 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 PAGE1O75459 146 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 ADCY5O95622 1261 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 RETP07949 1114 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 LMAN2Q12907 356 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 CDH18Q13634 790 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 ASIC2Q16515 512 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 FSCBQ5H9T9 825 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 BRMS1LQ5PSV4 323 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 MBLAC2Q68D91 279 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 SND1Q7KZF4 910 aaKnown RBP eCLIP24.44■■□□□ 1.5
VARS-217ENST00000440048 KIAA2013Q8IYS2 634 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 EMC1Q8N766 993 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 CYB5D2Q8WUJ1 264 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 ZC3H10Q96K80 434 aaKnown RBP24.44■■□□□ 1.5
VARS-217ENST00000440048 TKTL2Q9H0I9 626 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 ANLNQ9NQW6 1124 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 ARHGEF38Q9NXL2 777 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 HS3ST4Q9Y661 456 aa24.44■■□□□ 1.5
VARS-217ENST00000440048 PLXND1Q9Y4D7 1925 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 GJB6O95452 261 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 CALB1P05937 261 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 PBX1P40424 430 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 ATXN1P54253 815 aaKnown RBP24.43■■□□□ 1.5
VARS-217ENST00000440048 GSCP56915 257 aaPredicted RBP24.43■■□□□ 1.5
VARS-217ENST00000440048 AUHQ13825 339 aaKnown RBP24.43■■□□□ 1.5
VARS-217ENST00000440048 NFKBIBQ15653 356 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 FUT11Q495W5 492 aa24.43■■□□□ 1.5
VARS-217ENST00000440048 PLK5Q496M5 336 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms