RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 GPR174Q9BXC1 333 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 SYNCQ9H7C4 482 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 WSB2Q9NYS7 404 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-204ENST00000439619 NFE2L3Q9Y4A8 694 aa19.51■□□□□ 0.71
CCDC78-204ENST00000439619 OPHN1O60890 802 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 TRUB2O95900 331 aaKnown RBP19.5■□□□□ 0.71
CCDC78-204ENST00000439619 ASLP04424 464 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 SLC6A4P31645 630 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 ZBTB16Q05516 673 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 SFSWAPQ12872 951 aaKnown RBP19.5■□□□□ 0.71
CCDC78-204ENST00000439619 PLEKHG6Q3KR16 790 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 VWA3BQ502W6 1294 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 MS4A13Q5J8X5 152 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 CT47A1Q5JQC4 288 aaPredicted RBP19.5■□□□□ 0.71
CCDC78-204ENST00000439619 SYPL2Q5VXT5 272 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 IRF2BP1Q8IU81 584 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 ATP6V0D2Q8N8Y2 350 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 RNF34Q969K3 372 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 SLC39A13Q96H72 371 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 BTN2A3PQ96KV6 586 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 CNTNAP3BQ96NU0 1288 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 CNTNAP3Q9BZ76 1288 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 LHX5Q9H2C1 402 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 PDCL3Q9H2J4 239 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 TMEM245Q9H330 911 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 NDST4Q9H3R1 872 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 FAM204AQ9H8W3 233 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 ASNSD1Q9NWL6 643 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 DNAJC12Q9UKB3 198 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 PCDHGC3Q9UN70 934 aa19.5■□□□□ 0.71
CCDC78-204ENST00000439619 BECN2A8MW95 431 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 H0Y626 953 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 ARHGAP33O14559 1287 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 HSF2BPO75031 334 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 IGLV3-19P01714 112 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 DNTTP04053 509 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 HLA-EP13747 358 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 ABCB4P21439 1286 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 CD70P32970 193 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 SGSHP51688 502 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 COPAP53621 1224 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 TTC31Q49AM3 519 aaPredicted RBP19.49■□□□□ 0.71
CCDC78-204ENST00000439619 DCAF6Q58WW2 860 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 NADSYN1Q6IA69 706 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 CHSY1Q86X52 802 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 CACUL1Q86Y37 369 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 TUBGCP2Q9BSJ2 902 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 ZDHHC5Q9C0B5 715 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 PCED1AQ9H1Q7 454 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 CAPN10Q9HC96 672 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 ACP6Q9NPH0 428 aa19.49■□□□□ 0.71
CCDC78-204ENST00000439619 THADAQ6YHU6 1953 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 F5H5T6 163 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 RNASEH1O60930 286 aaKnown RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 CCR1P32246 355 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 RPS24P62847 133 aaKnown RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 DPCR1Q3MIW9 517 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 ZC3H12AQ5D1E8 599 aaKnown RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 RNF219Q5W0B1 726 aaPredicted RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 C11orf57Q6ZUT1 292 aaPredicted RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 PASD1Q8IV76 773 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 LGI2Q8N0V4 545 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 PPP1R9BQ96SB3 815 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 NUCKS1Q9H1E3 243 aaKnown RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 MIR1-1HGQ9H1L0 117 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 CD93Q9NPY3 652 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 KIAA1522Q9P206 1035 aaPredicted RBP19.48■□□□□ 0.71
CCDC78-204ENST00000439619 CYTH4Q9UIA0 394 aa19.48■□□□□ 0.71
CCDC78-204ENST00000439619 A0A1B0GTW7 788 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 KCNU1A8MYU2 1149 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 LUC7L3O95232 432 aaKnown RBP19.47■□□□□ 0.71
CCDC78-204ENST00000439619 TPM2P07951 284 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 PMLP29590 882 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 RDXP35241 583 aaKnown RBP19.47■□□□□ 0.71
CCDC78-204ENST00000439619 OXCT1P55809 520 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 ZNF252P-AS1Q0IIN9 211 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 PTPRNQ16849 979 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 RABGAP1LQ5R372 815 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 TTC39BQ5VTQ0 682 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-204ENST00000439619 OR6B2Q6IFH4 312 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 LRSAM1Q6UWE0 723 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 ZDHHC17Q8IUH5 632 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 MINDY1Q8N5J2 469 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 KDM1BQ8NB78 822 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 DNASE2BQ8WZ79 361 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 TTC17Q96AE7 1141 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 PRICKLE1Q96MT3 831 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-204ENST00000439619 CPXM1Q96SM3 734 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 DDIT4Q9NX09 232 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 NCKAP1Q9Y2A7 1128 aa19.47■□□□□ 0.71
CCDC78-204ENST00000439619 ABCA7Q8IZY2 2146 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 METTL12A8MUP2 240 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 UPK3BL1B0FP48 263 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 KCNJ18B7U540 433 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 UPK3BL2E5RIL1 263 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 TACR2P21452 398 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 NNMTP40261 264 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 CSKP41240 450 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 SHC2P98077 582 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms