RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 GFPT1Q06210 699 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 EIF4EBP2Q13542 120 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 TAF5Q15542 800 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 MAN2A1Q16706 1144 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 UAP1L1Q3KQV9 507 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 FNDC3BQ53EP0 1204 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 MS4A13Q5J8X5 152 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 SYCP2LQ5T4T6 812 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 SH3PXD2AQ5TCZ1 1133 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 CADM4Q8NFZ8 388 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 OR2T3Q8NH03 318 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 NUCKS1Q9H1E3 243 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 FSCN3Q9NQT6 498 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 STIM2Q9P246 746 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 PCDHGC3Q9UN70 934 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 NFE2L3Q9Y4A8 694 aa21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 MAP1BP46821 2468 aaKnown RBP21.07■□□□□ 0.96
NCKIPSD-206ENST00000439518 ATP5BP06576 529 aaKnown RBP21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 PITX1P78337 314 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 MIIPQ5JXC2 388 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 DPY19L2P1Q6NXN4 242 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 MFN1Q8IWA4 741 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 DNASE2BQ8WZ79 361 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 TTC17Q96AE7 1141 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 CPXM1Q96SM3 734 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 GPR174Q9BXC1 333 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 LHX5Q9H2C1 402 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 XPO7Q9UIA9 1087 aaKnown RBP21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 PCDH15Q96QU1 1955 aa21.06■□□□□ 0.96
NCKIPSD-206ENST00000439518 TRUB2O95900 331 aaKnown RBP21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 GLI1P08151 1106 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 CEACAM1P13688 526 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 POLR2EP19388 210 aaKnown RBP21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 SHC2P98077 582 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 DCAF6Q58WW2 860 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 ZC3H12AQ5D1E8 599 aaKnown RBP21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 WDR45BQ5MNZ6 344 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 CLEC17AQ6ZS10 378 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 FAM114A1Q8IWE2 563 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 RGL4Q8IZJ4 473 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 ZNF366Q8N895 744 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 SLC2A13Q96QE2 648 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 NUP58Q9BVL2 599 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 NDST4Q9H3R1 872 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 FBRSQ9HAH7 460 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 PRSS16Q9NQE7 514 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 SUSD2Q9UGT4 822 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 DNAJC12Q9UKB3 198 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 ANGPTL2Q9UKU9 493 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 INTS6Q9UL03 887 aaKnown RBP21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 CACNA1BQ00975 2339 aa21.05■□□□□ 0.96
NCKIPSD-206ENST00000439518 KMT2BQ9UMN6 2715 aaPredicted RBP21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 UPK3BL1B0FP48 263 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 UPK3BL2E5RIL1 263 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 FOXN3O00409 490 aaPredicted RBP21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 ARHGAP33O14559 1287 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 MOCS2O96007 188 aaPredicted RBP21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 APOEP02649 317 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 ACADMP11310 421 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 MAOBP27338 520 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 CLCN1P35523 988 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 PTK2Q05397 1052 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 SEMA3BQ13214 749 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 VWA3BQ502W6 1294 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 CACUL1Q86Y37 369 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 PASD1Q8IV76 773 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 CFAP52Q8N1V2 620 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 MYO19Q96H55 970 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 PPP1R13BQ96KQ4 1090 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 BTN2A3PQ96KV6 586 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 TUBGCP2Q9BSJ2 902 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 GTPBP2Q9BX10 602 aaKnown RBP21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 NUP62CLQ9H1M0 184 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 ASNSD1Q9NWL6 643 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 PCNX2A6NKB5 2137 aa21.04■□□□□ 0.96
NCKIPSD-206ENST00000439518 TYW5A2RUC4 315 aaKnown RBP21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 METTL12A8MUP2 240 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 CSKP41240 450 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 FSCBQ5H9T9 825 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 EFHC1Q5JVL4 640 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 PIP4P1Q86T03 277 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 SLC47A2Q86VL8 602 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 FAM71AQ8IYT1 594 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 CARNMT1Q8N4J0 409 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 PCED1AQ9H1Q7 454 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 DACH1Q9UI36 760 aa21.03■□□□□ 0.96
NCKIPSD-206ENST00000439518 ADAMTS9Q9P2N4 1935 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 KCNU1A8MYU2 1149 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 LUC7L3O95232 432 aaKnown RBP21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 ASLP04424 464 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 PNMA6AP0CW24 399 aaPredicted RBP21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 GNSP15586 552 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 TACR2P21452 398 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 ATXN3P54252 364 aaPredicted RBP21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 RPS14P62263 151 aaKnown RBP21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 CDK17Q00537 523 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 ZBTB16Q05516 673 aa21.02■□□□□ 0.96
NCKIPSD-206ENST00000439518 PLEKHG6Q3KR16 790 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms