RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 C6orf163Q5TEZ5 329 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 NAIF1Q69YI7 327 aaPredicted RBP16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 NCBP2-AS2Q69YL0 99 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 SLC26A9Q7LBE3 791 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 CLPTM1LQ96KA5 538 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 RILPQ96NA2 401 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 OLFM3Q96PB7 478 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 THTPAQ9BU02 230 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 GPAMQ9HCL2 828 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 DTLQ9NZJ0 730 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 DLGAP2Q9P1A6 1054 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 DNAJB4Q9UDY4 337 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 ASB3Q9Y575 518 aa16.88■□□□□ 0.29
CLCNKA-203ENST00000439316 RALGAPA2Q2PPJ7 1873 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 BRCA2P51587 3418 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 A0A0A0MRY4 1105 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 WDR27A2RRH5 827 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 GLRA3O75311 464 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 DGKIO75912 1065 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 VTNP04004 478 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 ALDOAP04075 364 aaKnown RBP16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 CPOXP36551 454 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 SCNN1AP37088 669 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 FDFT1P37268 417 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 PEX19P40855 299 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 ATXN1P54253 815 aaKnown RBP16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 SARNPP82979 210 aaKnown RBP16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 NAB1Q13506 487 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 RABGAP1LQ5R372 815 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 OR52E8Q6IFG1 317 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 PACS1Q6VY07 963 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 DENND5BQ6ZUT9 1274 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 RFX8Q6ZV50 586 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 TLK2Q86UE8 772 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 IFT43Q96FT9 208 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 SPATA13Q96N96 652 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 USP3Q9Y6I4 520 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 TRIP11Q15643 1979 aa16.87■□□□□ 0.29
CLCNKA-203ENST00000439316 HACD1B0YJ81 288 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PLIN3O60664 434 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 GRM5P41594 1212 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 APLP1P51693 650 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 N4BP2L1Q5TBK1 243 aaPredicted RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 ARHGAP17Q68EM7 881 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 WDR75Q8IWA0 830 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 UNC5BQ8IZJ1 945 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 CCDC33Q8N5R6 958 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PPP1R14CQ8TAE6 165 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PIWIL2Q8TC59 973 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 MAGEB5Q9BZ81 275 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 EIF2B3Q9NR50 452 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 DDX43Q9NXZ2 648 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 SCOCQ9UIL1 159 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 DNAJC16Q9Y2G8 782 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 SCN1AP35498 2009 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 TPP1O14773 563 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PPEF2O14830 753 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 ITM2AO43736 263 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 LYPLA1O75608 230 aaPredicted RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 FLT3LGP49771 235 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 RPL10AP62906 217 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 IRX4P78413 519 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 CAP1Q01518 475 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 PDE1CQ14123 709 aaPredicted RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 GSTA3Q16772 222 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 LRRC8BQ6P9F7 803 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 CCDC185Q8N715 623 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 ZNF483Q8TF39 744 aaPredicted RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 CLEC4CQ8WTT0 213 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 TFB1MQ8WVM0 346 aaKnown RBP16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 HTR3CQ8WXA8 447 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 GATA6Q92908 595 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 SOX13Q9UN79 622 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 SNX9Q9Y5X1 595 aa16.86■□□□□ 0.29
CLCNKA-203ENST00000439316 MAP3K13O43283 966 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 FESP07332 822 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 SLC1A6P48664 564 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 RPL34P49207 117 aaKnown RBP16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 AP2B1P63010 937 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 PCLAFQ15004 111 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 TMCO4Q5TGY1 634 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 C1orf146Q5VVC0 180 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 HACE1Q8IYU2 909 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 CDKL2Q92772 493 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 APOL6Q9BWW8 343 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 DERAQ9Y315 318 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 MFHAS1Q9Y4C4 1052 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 COL1A2P08123 1366 aa16.85■□□□□ 0.29
CLCNKA-203ENST00000439316 A0A088AWK7 358 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 MAGEA13PA6NCF6 341 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 AHCYL1O43865 530 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms