RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SNX10Q9Y5X0 201 aa21.39■■□□□ 1.01
CHD3-204ENST00000439235 ZFP37Q9Y6Q3 630 aaPredicted RBP21.39■■□□□ 1.01
CHD3-204ENST00000439235 LAMA3Q16787 3333 aa21.39■■□□□ 1.01
CHD3-204ENST00000439235 CUL9Q8IWT3 2517 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 E9PAM4 449 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 FAM72CH0Y354 149 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 GREM1O60565 184 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 LRIG2O94898 1065 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 TACR2P21452 398 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 GGCXP38435 758 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 MMRN1Q13201 1228 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 AUHQ13825 339 aaKnown RBP21.38■■□□□ 1.01
CHD3-204ENST00000439235 ZNF77Q15935 545 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 ADGRF1Q5T601 910 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 FAM72AQ5TYM5 149 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 MANEALQ5VSG8 457 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 NADSYN1Q6IA69 706 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 FAM72DQ6L9T8 149 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 FAM72BQ86X60 149 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 SUSD6Q92537 303 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 WBP2Q969T9 261 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 MS4A14Q96JA4 679 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 ASB16Q96NS5 453 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 PRMT1Q99873 361 aaKnown RBP21.38■■□□□ 1.01
CHD3-204ENST00000439235 POMKQ9H5K3 350 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 TRPV4Q9HBA0 871 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 OBP2AQ9NY56 170 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 CCL26Q9Y258 94 aa21.38■■□□□ 1.01
CHD3-204ENST00000439235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 H3BQ06 376 aaPredicted RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 APOL1O14791 398 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 FGF10O15520 208 aaPredicted RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 KRT10P13645 584 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 ZFXP17010 805 aaPredicted RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 KCNA5P22460 613 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 IL4RP24394 825 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 EPHB2P29323 1055 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 HOXC13P31276 330 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 GBP2P32456 591 aaPredicted RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 SMAD4Q13485 552 aaKnown RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 FAM133BQ5BKY9 247 aaKnown RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 FAM78AQ5JUQ0 283 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 RABGAP1LQ5R372 815 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 BBS12Q6ZW61 710 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 ANKS1BQ7Z6G8 1248 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 FAM217AQ8IXS0 508 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 E2F7Q96AV8 911 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 HEMGNQ9BXL5 484 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 CATSPERBQ9H7T0 1116 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 TBC1D14Q9P2M4 693 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 PPARGC1AQ9UBK2 798 aaKnown RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 VANGL2Q9ULK5 521 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 MYO9BQ13459 2157 aa21.37■■□□□ 1.01
CHD3-204ENST00000439235 HELZP42694 1942 aaKnown RBP21.37■■□□□ 1.01
CHD3-204ENST00000439235 CHKAP35790 457 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 DPYSQ14117 519 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 LLGL1Q15334 1064 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 RWDD4Q6NW29 188 aaKnown RBP21.36■■□□□ 1.01
CHD3-204ENST00000439235 FBXL22Q6P050 247 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 POTEHQ6S545 545 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 C14orf80Q86SX3 495 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 LGI2Q8N0V4 545 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 PCDH19Q8TAB3 1148 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 PPM1EQ8WY54 764 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 RPRD1AQ96P16 312 aaPredicted RBP21.36■■□□□ 1.01
CHD3-204ENST00000439235 L2HGDHQ9H9P8 463 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 ARHGEF4Q9NR80 690 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 DONSONQ9NYP3 566 aa21.36■■□□□ 1.01
CHD3-204ENST00000439235 NUP210Q8TEM1 1887 aaPredicted RBP21.35■■□□□ 1.01
CHD3-204ENST00000439235 IGLV3-10A0A075B6K4 115 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 GOLGA6L10A0A0M3HER8 536 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 GOLGA6L7A0A1B0GV03 622 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 TYW5A2RUC4 315 aaKnown RBP21.35■■□□□ 1.01
CHD3-204ENST00000439235 SLC9A3R1O14745 358 aaPredicted RBP21.35■■□□□ 1.01
CHD3-204ENST00000439235 CST8O60676 142 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 TGM2P21980 687 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 KLF1Q13351 362 aaPredicted RBP21.35■■□□□ 1.01
CHD3-204ENST00000439235 TTC39BQ5VTQ0 682 aaPredicted RBP21.35■■□□□ 1.01
CHD3-204ENST00000439235 SLC9A4Q6AI14 798 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 OTOP3Q7RTS5 596 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 ZNF683Q8IZ20 524 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 CPXM2Q8N436 756 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 TTC13Q8NBP0 860 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 MNS1Q8NEH6 495 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 HLA-CQ95604 372 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 OTUB2Q96DC9 234 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 MYADMQ96S97 322 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 ZYG11BQ9C0D3 744 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 RETREG1Q9H6L5 497 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 SMARCAL1Q9NZC9 954 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 NEU3Q9UQ49 428 aa21.35■■□□□ 1.01
CHD3-204ENST00000439235 RHOQP17081 205 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 ERCC2P18074 760 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 AMPD1P23109 780 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 SLC6A4P31645 630 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 DYNLT1P63172 113 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 C5orf22Q49AR2 442 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 TMCO3Q6UWJ1 677 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 BBS7Q8IWZ6 715 aa21.34■■□□□ 1.01
CHD3-204ENST00000439235 PQLC3Q8N755 202 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms