RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PTPRJQ12913 1337 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 AIM2O14862 343 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 MED7O43513 233 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
DHFR-201ENST00000439211 ZMPSTE24O75844 475 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 TCN1P20061 433 aaPredicted RBP16.21■□□□□ 0.19
DHFR-201ENST00000439211 IREB2P48200 963 aaKnown RBP16.21■□□□□ 0.19
DHFR-201ENST00000439211 WNT7BP56706 349 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 ROR1Q01973 937 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 FAM160B1Q5W0V3 765 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 DCDC5Q6ZRR9 648 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 AHI1Q8N157 1196 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.21■□□□□ 0.19
DHFR-201ENST00000439211 E2F7Q96AV8 911 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 GBA3Q9H227 469 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 SACM1LQ9NTJ5 587 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 RCVRNP35243 200 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 HNRNPDQ14103 355 aaKnown RBP16.21■□□□□ 0.19
DHFR-201ENST00000439211 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 C11orf74Q86VG3 221 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 RNF148Q8N7C7 305 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 ITPKCQ96DU7 683 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 HACD3Q9P035 362 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 SHOC2Q9UQ13 582 aa16.21■□□□□ 0.19
DHFR-201ENST00000439211 KCNN4O15554 427 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 PRKCBP05771 671 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 PABPC1P11940 636 aaKnown RBP16.21■□□□□ 0.18
DHFR-201ENST00000439211 CPA3P15088 417 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 RGS7P49802 495 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 CDK9P50750 372 aaKnown RBP16.21■□□□□ 0.18
DHFR-201ENST00000439211 TPTEP56180 551 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 CYP2A13Q16696 494 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 CLPPQ16740 277 aaPredicted RBP16.21■□□□□ 0.18
DHFR-201ENST00000439211 RIN3Q8TB24 985 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 RPF1Q9H9Y2 349 aaKnown RBP16.21■□□□□ 0.18
DHFR-201ENST00000439211 HESX1Q9UBX0 185 aa16.21■□□□□ 0.18
DHFR-201ENST00000439211 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 TMEM191CA6NGB0 347 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 PLSCR1O15162 318 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 TM9SF1O15321 606 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 VNN1O95497 513 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 SMIM18P0DKX4 95 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 MMP8P22894 467 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 NAMPTP43490 491 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 CNTN2Q02246 1040 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 TCEAL1Q15170 157 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 GPR107Q5VW38 600 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 ANKRD22Q5VYY1 191 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 NIPAL1Q6NVV3 410 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 PHF13Q86YI8 300 aaPredicted RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 C7orf31Q8N865 590 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 ZNF280CQ8ND82 737 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 MAGED2Q9UNF1 606 aaPredicted RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 AP4S1Q9Y587 144 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 NRAPQ86VF7 1730 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 PEX10O60683 326 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 KRT37O76014 449 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 FUCA1P04066 466 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 MSX2P35548 267 aaPredicted RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 ELK3P41970 407 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 HSPA13P48723 471 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 MRPS15P82914 257 aaKnown RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 GRM2Q14416 872 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 PPP2R5DQ14738 602 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.2■□□□□ 0.18
DHFR-201ENST00000439211 DDX28Q9NUL7 540 aaKnown RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 SLC24A2Q9UI40 661 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 NOX1Q9Y5S8 564 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 hCG_1818297A0A087WSY0 165 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 BUD23O43709 281 aaKnown RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 PLA2G6O60733 806 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 RALGDSQ12967 914 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 ZNF829Q3KNS6 432 aaPredicted RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 DENND1AQ8TEH3 1009 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 FBXL18Q96ME1 805 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 NTPCRQ9BSD7 190 aaKnown RBP16.2■□□□□ 0.18
DHFR-201ENST00000439211 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 POLIQ9UNA4 740 aa16.2■□□□□ 0.18
DHFR-201ENST00000439211 TRIM49D1C9J1S8 452 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 PSMD11O00231 422 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 PMM2O15305 246 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 BAIAP3O94812 1187 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 PDGFRAP16234 1089 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 GK3PQ14409 553 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 ZDHHC7Q9NXF8 308 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 COL5A3P25940 1745 aaPredicted RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 FAM47E-STBD1D6RA91 191 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 MAN1A2O60476 641 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 DNAJA2O60884 412 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 TCEA3O75764 348 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 ENDOUP21128 410 aaKnown RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 RPL22P35268 128 aaKnown RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 CDH15P55291 814 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 BNIP3Q12983 259 aa16.19■□□□□ 0.18
DHFR-201ENST00000439211 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
DHFR-201ENST00000439211 MARCH7Q9H992 704 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms