RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 MDGA1Q8NFP4 955 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 IGSF8Q969P0 613 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 ACDQ96AP0 544 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 PGAP3Q96FM1 320 aaPredicted RBP13.75□□□□□ -0.21
LINC00399-201ENST00000439008 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 SLC2A11Q9BYW1 496 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC00399-201ENST00000439008 INVSQ9Y283 1065 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 RAD54BQ9Y620 910 aa13.75□□□□□ -0.21
LINC00399-201ENST00000439008 DDX3XO00571 662 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 PAGE1O75459 146 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 APBB3O95704 486 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 APOEP02649 317 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 GYPCP04921 128 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 PLEKP08567 350 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 NTSR1P30989 418 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CCR1P32246 355 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 RFC1P35251 1148 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 NUMBP49757 651 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 NRLP54845 237 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 GSCP56915 257 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 SNX16P57768 344 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ENPP2Q13822 863 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 PPP2R5DQ14738 602 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ASIC2Q16515 512 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 C15orf59Q2T9L4 293 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 PPP1R15BQ5SWA1 713 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 MPP7Q5T2T1 576 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ANO7Q6IWH7 933 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 FBXL22Q6P050 247 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ARCQ7LC44 396 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 RASSF3Q86WH2 238 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CHSY1Q86X52 802 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 MCOLN2Q8IZK6 566 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CAMKK1Q8N5S9 505 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 HJURPQ8NCD3 748 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 OR52K2Q8NGK3 314 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CYB5D2Q8WUJ1 264 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 TPSD1Q9BZJ3 242 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 EDEM3Q9BZQ6 932 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 SLC6A17Q9H1V8 727 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 SEPT11Q9NVA2 429 aaKnown RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ELOVL2Q9NXB9 296 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 ADAM22Q9P0K1 906 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 THAP10Q9P2Z0 257 aaPredicted RBP13.74□□□□□ -0.21
LINC00399-201ENST00000439008 EBF1Q9UH73 591 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 HS3ST4Q9Y661 456 aa13.74□□□□□ -0.21
LINC00399-201ENST00000439008 PLXND1Q9Y4D7 1925 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 AXIN1O15169 862 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ENDOD1O94919 500 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 LMNAP02545 664 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 PABPC1P11940 636 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 GABRG2P18507 467 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 PRKCHP24723 683 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 GBP1P32455 592 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 IL12RB1P42701 662 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ZNF445P59923 1031 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 RPL7AP62424 266 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 TPM4P67936 248 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ATP11AP98196 1134 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 DEUP1Q05D60 604 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 LMAN2Q12907 356 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 AUHQ13825 339 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ZNF234Q14588 700 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 PTPRNQ16849 979 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 FUT11Q495W5 492 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 HSF5Q4G112 596 aaPredicted RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ANKS1BQ7Z6G8 1248 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 ATP6V0D2Q8N8Y2 350 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 TSTD1Q8NFU3 115 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 FIBINQ8TAL6 211 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 MYO19Q96H55 970 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 GABRG3Q99928 467 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 CD93Q9NPY3 652 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 GGA2Q9UJY4 613 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 CAPN11Q9UMQ6 739 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 SMG5Q9UPR3 1016 aaKnown RBP13.73□□□□□ -0.21
LINC00399-201ENST00000439008 STON1Q9Y6Q2 735 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
LINC00399-201ENST00000439008 CCDC163A0A0D9SF12 145 aa13.72□□□□□ -0.21
LINC00399-201ENST00000439008 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
LINC00399-201ENST00000439008 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
LINC00399-201ENST00000439008 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
LINC00399-201ENST00000439008 CNTN5O94779 1100 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms