RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SUCLG2Q96I99 432 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZFYVE19Q96K21 471 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 LYZL4Q96KX0 146 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRMOQ9BU70 441 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 BRINP2Q9C0B6 783 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 INO80Q9ULG1 1556 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 PIK3R4Q99570 1358 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
HMGB1P18-201ENST00000438801 E2F8A0AVK6 867 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MBD3L4A6NDZ8 208 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MBD3L3A6NE82 208 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 B4DGG1 531 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 PYCARD-AS1I3L0S3 204 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 RRP9O43818 475 aaKnown RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TULP3O75386 442 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TUSC2O75896 110 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 RASSF9O75901 435 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TOMM40O96008 361 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MYBP10242 640 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 HGFP14210 728 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MCM5P33992 734 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 PTDSS1P48651 473 aaKnown RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 GATMP50440 423 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 PGDP52209 483 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 YPEL5P62699 121 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MCL1Q07820 350 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 SLC14A1Q13336 389 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 SLC9C1Q4G0N8 1177 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 NPNTQ6UXI9 565 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 MAEAQ7L5Y9 396 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 UBE2Q1Q7Z7E8 422 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TPH2Q8IWU9 490 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TCP11L2Q8N4U5 519 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 C12orf76Q8N812 135 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZBTB34Q8NCN2 500 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 ACRBPQ8NEB7 543 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 NGDNQ8NEJ9 315 aaKnown RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 IGFBPL1Q8WX77 278 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 B3GNT5Q9BYG0 378 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 FAM234AQ9H0X4 552 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TAF1DQ9H5J8 278 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 SACM1LQ9NTJ5 587 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 NKX1-2Q9UD57 310 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZNF180Q9UJW8 692 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRPM1Q7Z4N2 1603 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 CREBBPQ92793 2442 aa3.48□□□□□ -1.85
HMGB1P18-201ENST00000438801 CDC42BPBQ9Y5S2 1711 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 TENM4Q6N022 2769 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 SCN4AP35499 1836 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 KDM6AO15550 1401 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRIM43BA6NCK2 446 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 PRR23D1E9PI22 279 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 AGPSO00116 658 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 PIAS2O75928 621 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 PRR23D2P0DMB1 279 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 DPEP1P16444 411 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 IBSPP21815 317 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 KLRC1P26715 233 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 TACR3P29371 465 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 CCR10P46092 362 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ITGA8P53708 1063 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 SUMO3P55854 103 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 HSF1Q00613 529 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 DEUP1Q05D60 604 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 STIM1Q13586 685 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ARHGEF7Q14155 803 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ERV3-1Q14264 604 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 SEMA3AQ14563 771 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 TTF1Q15361 905 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZNF750Q32MQ0 723 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 EPM2AIP1Q7L775 607 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 OVCH2Q7RTZ1 564 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 SPATA3Q8NHX4 192 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 TRIM43Q96BQ3 446 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 KAZALD1Q96I82 304 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 HIC2Q96JB3 615 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 STK31Q9BXU1 1019 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 RTFDC1Q9BY42 306 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 CPNE7Q9UBL6 633 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ASAP1Q9ULH1 1129 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 RIMKLBQ9ULI2 386 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 NOP58Q9Y2X3 529 aaKnown RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 KAT6BQ8WYB5 2073 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 KIF13BQ9NQT8 1826 aa3.47□□□□□ -1.85
HMGB1P18-201ENST00000438801 DMXL1Q9Y485 3027 aa3.46□□□□□ -1.85
HMGB1P18-201ENST00000438801 QRICH2Q9H0J4 1663 aa3.46□□□□□ -1.85
HMGB1P18-201ENST00000438801 TNS3Q68CZ2 1445 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CAPN8A6NHC0 703 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 A8MVJ9 347 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 FYB1O15117 783 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 SMAD6O43541 496 aaKnown RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 AKAP10O43572 662 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CTNND1O60716 968 aaKnown RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 DDNO94850 711 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 PARP1P09874 1014 aaKnown RBP3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CD19P15391 556 aa3.46□□□□□ -1.86
HMGB1P18-201ENST00000438801 CPA2P48052 419 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms