RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 WDR12Q9GZL7 423 aaKnown RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 SLC25A32Q9H2D1 315 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 AGO4Q9HCK5 861 aaKnown RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 SLC39A10Q9ULF5 831 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 AFG3L2Q9Y4W6 797 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 SPAG9O60271 1321 aaKnown RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 PNPLA6Q8IY17 1366 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 CEP350Q5VT06 3117 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 LY6G6EA0A0G2JKS1 128 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 CA12O43570 354 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 WDR47O94967 919 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 TMIGD3P0DMS9 266 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 CTSAP10619 480 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 SLC5A2P31639 672 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 HSF1Q00613 529 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 TNFAIP2Q03169 654 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 CCDC15Q0P6D6 951 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 RABEP1Q15276 862 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ARHGAP15Q53QZ3 475 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 EARS2Q5JPH6 523 aaKnown RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 DGKKQ5KSL6 1271 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 RAP1GAP2Q684P5 730 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ABLIM2Q6H8Q1 611 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 CCDC174Q6PII3 467 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 USP17L6PQ6QN14 398 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 MRPL10Q7Z7H8 261 aaKnown RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ENAHQ8N8S7 591 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZNF527Q8NB42 609 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 MORC4Q8TE76 937 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 IPO4Q8TEX9 1081 aaKnown RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZBTB9Q96C00 473 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 VCPIP1Q96JH7 1222 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 PCDHAC1Q9H158 963 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 PPCSQ9HAB8 311 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 USP29Q9HBJ7 922 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZMYND8Q9ULU4 1186 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 CACNA1IQ9P0X4 2223 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 SETD5Q9C0A6 1442 aa3.84□□□□□ -1.79
HMGB3P12-201ENST00000438745 A2MP01023 1474 aa3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 PZPP20742 1482 aa3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 NKTRP30414 1462 aaKnown RBP3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 ARHGAP23Q9P227 1491 aa3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 DIP2AQ14689 1571 aa3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZC3H13Q5T200 1668 aaKnown RBP3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 ADGBQ8N7X0 1667 aa3.84□□□□□ -1.8
HMGB3P12-201ENST00000438745 A0A087WV62 115 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 C16orf96A6NNT2 1141 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 PROB1E7EW31 1015 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 PLA2G6O60733 806 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 GABRB3P28472 473 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 GALNSP34059 522 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 PBX1P40424 430 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 DGKQP52824 942 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 TXNL4AP83876 142 aaKnown RBP3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 MAPK7Q13164 816 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 FAM110CQ1W6H9 321 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 GRAMD1BQ3KR37 738 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 TUBB8Q3ZCM7 444 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 FAM83BQ5T0W9 1011 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 FAM90A2PQ658T7 463 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 ANO7Q6IWH7 933 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 FSTL5Q8N475 847 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 BCAS4Q8TDM0 211 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 ABHD5Q8WTS1 349 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 HMCESQ96FZ2 354 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 TMEM41AQ96HV5 264 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 SNX27Q96L92 541 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 HS6ST2Q96MM7 605 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 CINPQ9BW66 212 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 TTLL2Q9BWV7 592 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 MLXIPLQ9NP71 852 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 TRNAU1APQ9NX07 287 aaKnown RBP3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 MTMR4Q9NYA4 1195 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 RGL1Q9NZL6 768 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 PI4KBQ9UBF8 816 aa3.83□□□□□ -1.8
HMGB3P12-201ENST00000438745 MYO5CQ9NQX4 1742 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 CAMSAP2Q08AD1 1489 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PTCH1Q13635 1447 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 TNS2Q63HR2 1409 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 ZMYM2Q9UBW7 1377 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 AQP12BA6NM10 295 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 SOCS2O14508 198 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PIP5K1BO14986 540 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 FFAR2O15552 330 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 NBNO60934 754 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 COQ9O75208 318 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PRF1P14222 555 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 IDEP14735 1019 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PECAM1P16284 738 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 ITGB6P18564 788 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 DUSP1P28562 367 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 CHKAP35790 457 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 JAK3P52333 1124 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PUM3Q15397 648 aaKnown RBP3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 RBMS2Q15434 407 aaKnown RBP3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 RAB30Q15771 203 aa3.82□□□□□ -1.8
HMGB3P12-201ENST00000438745 PFKFB3Q16875 520 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms