RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 RAB21Q9UL25 225 aa4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 TRPC5Q9UL62 973 aaPredicted RBP4.26□□□□□ -1.73
LSM1P1-201ENST00000438629 TISP43B9A030 160 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 M0QYT0 321 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TK1P04183 234 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TUBB4AP04350 444 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TNNT1P13805 278 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 IGFBP2P18065 325 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 NDUFS1P28331 727 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 RBM5P52756 815 aaKnown RBP eCLIP4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TAS2R50P59544 299 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 HSF1Q00613 529 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TFF2Q03403 129 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 FOXF2Q12947 444 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TAF5Q15542 800 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 GALNTL6Q49A17 601 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TMEM119Q4V9L6 283 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 RASGRP2Q7LDG7 609 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 TMEM57Q8N5G2 664 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 C8orf58Q8NAV2 365 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 PNISRQ8TF01 805 aaKnown RBP4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 AFG1LQ8WV93 481 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 UBE2Q2Q8WVN8 375 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 KAT2BQ92831 832 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 CELF1Q92879 486 aaKnown RBP4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 CRAMP1Q96RY5 1269 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 HTATIP2Q9BUP3 242 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 PRDM13Q9H4Q3 707 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 NOD2Q9HC29 1040 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 ITM2CQ9NQX7 267 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 B3GNT3Q9Y2A9 372 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 PCDHA10Q9Y5I2 948 aa4.25□□□□□ -1.73
LSM1P1-201ENST00000438629 EMSYQ7Z589 1322 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PRYO14603 147 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 DSCR3O14972 297 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 NPHP1O15259 732 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 CREB3O43889 395 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 AKR1A1P14550 325 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 STAT6P42226 847 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 ZNF84P51523 738 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 RCAN1P53805 252 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 FOXL2P58012 376 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 CUL4BQ13620 913 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 DCTN1Q14203 1278 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 TAF12Q16514 161 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 MIS18BP1Q6P0N0 1132 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 ANKS1BQ7Z6G8 1248 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 UBE2Q1Q7Z7E8 422 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 CERS3Q8IU89 383 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PTGR2Q8N8N7 351 aaPredicted RBP4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 FAM47BQ8NA70 645 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC2A12Q8TD20 617 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 FAM118BQ9BPY3 351 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PYM1Q9BRP8 204 aaKnown RBP4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 ABHD14AQ9BUJ0 271 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 ABHD16BQ9H3Z7 469 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 CHODLQ9H9P2 273 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PDE11AQ9HCR9 933 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 RASSF1Q9NS23 344 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 FLRT1Q9NZU1 646 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PTGFRNQ9P2B2 879 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 IPO11Q9UI26 975 aaKnown RBP4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 GPR52Q9Y2T5 361 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 DERAQ9Y315 318 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 PCDHGB3Q9Y5G1 929 aa4.24□□□□□ -1.73
LSM1P1-201ENST00000438629 WDR17Q8IZU2 1322 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 MANSC4A6NHS7 340 aaPredicted RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 PPP6CO00743 305 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 INPPL1O15357 1258 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 KRT38O76015 456 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 NHLRC4P0CG21 123 aaPredicted RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 CYP2D6P10635 497 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 TGM2P21980 687 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 OAZ1P54368 228 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 SLC37A1P57057 533 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 DMWDQ09019 674 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 GAB1Q13480 694 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 ZNF268Q14587 947 aaPredicted RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 KPNB1Q14974 876 aaKnown RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 ANXA2RQ3ZCQ2 193 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 CTXN3Q4LDR2 81 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 SYCE2Q6PIF2 218 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 SYT13Q7L8C5 426 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 C2CD5Q86YS7 1000 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 GALNT16Q8N428 558 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 ENDOVQ8N8Q3 282 aaKnown RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 USP38Q8NB14 1042 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 OSR1Q8TAX0 266 aaPredicted RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 CSGALNACT1Q8TDX6 532 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 PIGKQ92643 395 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 C5orf34Q96MH7 638 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 GPR78Q96P69 363 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 EFHD1Q9BUP0 239 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 KCND3Q9UK17 655 aa4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 COPG1Q9Y678 874 aaKnown RBP4.23□□□□□ -1.73
LSM1P1-201ENST00000438629 FAM90A20PA6NIJ5 464 aa4.22□□□□□ -1.73
LSM1P1-201ENST00000438629 AGAP5A6NIR3 686 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms