RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
SMAD9-IT1-201ENST00000437983 ERVMER34-1Q9H9K5 563 aa12.9□□□□□ -0.34
SMAD9-IT1-201ENST00000437983 UCKL1Q9NWZ5 548 aa12.9□□□□□ -0.34
SMAD9-IT1-201ENST00000437983 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
SMAD9-IT1-201ENST00000437983 C10orf142B7Z368 130 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CYP26A1O43174 497 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 STC2O76061 302 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TMEM191BP0C7N4 346 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 JUNDP17535 347 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 SCP2P22307 547 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ASIC1P78348 528 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ARID5AQ03989 594 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TGIF1Q15583 401 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TBR1Q16650 682 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TTC31Q49AM3 519 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TMEM119Q4V9L6 283 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 FBXL12Q9NXK8 326 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PLEKHB1Q9UF11 243 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ATXN7L1Q9ULK2 861 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CSMD1Q96PZ7 3565 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 KIF26BQ2KJY2 2108 aa12.89□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 LY6G6EA0A0G2JKS1 128 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 A0A1W2PP55 124 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 FFAR2O15552 330 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PPFIA2O75334 1257 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 BEST1O76090 585 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GJB6O95452 261 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ITGB2P05107 769 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GIMD1P0DJR0 217 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CKMT1AP12532 417 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 RIPPLY3P57055 190 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GOLGA8FQ08AF8 430 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GOLGA8DPQ0D2H9 430 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 FAM35AQ86V20 835 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 OXR1Q8N573 874 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 NOC3LQ8WTT2 800 aaKnown RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 SLC25A18Q9H1K4 315 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 FOXP1Q9H334 677 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CYLDQ9NQC7 956 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 NCKAP1Q9Y2A7 1128 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ENTPD2Q9Y5L3 495 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 U3KQA8 63 aa12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 COL27A1Q8IZC6 1860 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 A8MXQ7 604 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TIMM44O43615 452 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 NOBOXO60393 691 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TACC1O75410 805 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TNFSF15O95150 251 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 HMBSP08397 361 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 SFTPCP11686 197 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TGM2P21980 687 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CYP4F2P78329 520 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 EHHADHQ08426 723 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 POSTNQ15063 836 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TMCO4Q5TGY1 634 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ZNF776Q68DI1 518 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CCDC83Q8IWF9 413 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 OR4C6Q8NH72 309 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 SMOQ99835 787 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 MED10Q9BTT4 135 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ABCG4Q9H172 646 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TLR8Q9NR97 1041 aaKnown RBP12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 SPENQ96T58 3664 aaKnown RBP12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 MID1O15344 667 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 REC8O95072 547 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CST3P01034 146 aaPredicted RBP12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 RARGP13631 454 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 DGKAP23743 735 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 HLA-FP30511 346 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 AFMP43652 599 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PPP2CBP62714 309 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 PPP2CAP67775 309 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ZNF720Q7Z2F6 126 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 GPRIN1Q7Z2K8 1008 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 CLEC14AQ86T13 490 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ADIPOR2Q86V24 386 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 MFSD2AQ8NA29 543 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 OR2T34Q8NGX1 318 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 MAPK15Q8TD08 544 aa12.86□□□□□ -0.35
SMAD9-IT1-201ENST00000437983 ANKRD36BP1Q96IX9 119 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms