RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 IRX2Q9BZI1 471 aaPredicted RBP16.34■□□□□ 0.21
CALD1-208ENST00000435928 BTBD1Q9H0C5 482 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.34■□□□□ 0.21
CALD1-208ENST00000435928 LHX6Q9UPM6 363 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 KNL1Q8NG31 2342 aa16.34■□□□□ 0.21
CALD1-208ENST00000435928 TYW5A2RUC4 315 aaKnown RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 IRAK2O43187 625 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 LTFP02788 710 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 CD70P32970 193 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 FMO5P49326 533 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 RPS14P62263 151 aaKnown RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 SCAPQ12770 1279 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 STILQ15468 1287 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 PIK3R6Q5UE93 754 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 ZNF776Q68DI1 518 aaPredicted RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 PMF1Q6P1K2 205 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 MFN1Q8IWA4 741 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 BAHD1Q8TBE0 780 aaPredicted RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 SLC35F5Q8WV83 523 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 METTL14Q9HCE5 456 aaKnown RBP16.33■□□□□ 0.2
CALD1-208ENST00000435928 TM9SF3Q9HD45 589 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 PRSS16Q9NQE7 514 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 PCDHB4Q9Y5E5 795 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 PCDHGB2Q9Y5G2 931 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 SLCO1B1Q9Y6L6 691 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 ADAMTS20P59510 1910 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 CABIN1Q9Y6J0 2220 aa16.33■□□□□ 0.2
CALD1-208ENST00000435928 LOC400499M0QZD8 3231 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 GOLGA6L7A0A1B0GV03 622 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 PSMA7O14818 248 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 ACSL4O60488 711 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 FSBPO95073 299 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 C7P10643 843 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 SLC6A4P31645 630 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 GRIA4P48058 902 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 TBX4P57082 545 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 STIM1Q13586 685 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 FAM133BQ5BKY9 247 aaKnown RBP16.32■□□□□ 0.2
CALD1-208ENST00000435928 CCNI2Q6ZMN8 369 aaPredicted RBP16.32■□□□□ 0.2
CALD1-208ENST00000435928 SLCO6A1Q86UG4 719 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 HJURPQ8NCD3 748 aaPredicted RBP16.32■□□□□ 0.2
CALD1-208ENST00000435928 RHBDD1Q8TEB9 315 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
CALD1-208ENST00000435928 BIRC7Q96CA5 298 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 CDC6Q99741 560 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 OSGEPQ9NPF4 335 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 STIM2Q9P246 746 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 BAHCC1Q9P281 2608 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 ANKRD6Q9Y2G4 727 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 SNX11Q9Y5W9 270 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 CELSR3Q9NYQ7 3312 aa16.32■□□□□ 0.2
CALD1-208ENST00000435928 TAF4O00268 1085 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 GABBR2O75899 941 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 FBXO21O94952 628 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 CAPNS1P04632 268 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 BRD2P25440 801 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 ST8SIA6P61647 398 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 CETN1Q12798 172 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 CNGA2Q16280 664 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 KIF19Q2TAC6 998 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 CCDC40Q4G0X9 1142 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 LRSAM1Q6UWE0 723 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 LAYNQ6UX15 382 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 HSFY1Q96LI6 401 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 PRICKLE1Q96MT3 831 aaPredicted RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 DDX50Q9BQ39 737 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 CCDC86Q9H6F5 360 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
CALD1-208ENST00000435928 KIAA1522Q9P206 1035 aaPredicted RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
CALD1-208ENST00000435928 PMM2O15305 246 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 CD27P26842 260 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 CCT8P50990 548 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 CDH18Q13634 790 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 NADSYN1Q6IA69 706 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 DBX2Q6ZNG2 339 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 CCDC117Q8IWD4 279 aaPredicted RBP16.3■□□□□ 0.2
CALD1-208ENST00000435928 FIBINQ8TAL6 211 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 GANCQ8TET4 914 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 KAT5Q92993 513 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 IGSF8Q969P0 613 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 AZIN2Q96A70 460 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 CEP63Q96MT8 703 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 SERPINB11Q96P15 392 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 MIS12Q9H081 205 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 RSPH9Q9H1X1 276 aaPredicted RBP16.3■□□□□ 0.2
CALD1-208ENST00000435928 TOR4AQ9NXH8 423 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 SCML1Q9UN30 329 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
CALD1-208ENST00000435928 ACACAQ13085 2346 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms