RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TBCCQ15814 346 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 CCL15Q16663 113 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 TEDDM1Q5T9Z0 273 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 ZNF567Q8N184 647 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 WNT8BQ93098 351 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 FAM149B1Q96BN6 582 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 CCDC106Q9BWC9 280 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 PRDM12Q9H4Q4 367 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 TMPRSS4Q9NRS4 437 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 STAP1Q9ULZ2 295 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 ZNF236Q9UL36 1845 aa16.53■□□□□ 0.24
HLA-DQB2-231ENST00000435145 HAS3O00219 553 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 GABRDO14764 452 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 TPP1O14773 563 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 PPP1R12AO14974 1030 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 BEST1O76090 585 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 LUC7L3O95232 432 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 FGF3P11487 239 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 AP1B1Q10567 949 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 INSCQ1MX18 579 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 FASTKD1Q53R41 847 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 CASC4Q6P4E1 433 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 RFX8Q6ZV50 586 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 PLEKHH3Q7Z736 793 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 TMPRSS6Q8IU80 811 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 ARRDC4Q8NCT1 418 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 ISL2Q96A47 359 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 MCUR1Q96AQ8 359 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 ZNF778Q96MU6 729 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 FERMT1Q9BQL6 677 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 SYBUQ9NX95 663 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 PPARGC1AQ9UBK2 798 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 PSAT1Q9Y617 370 aa16.52■□□□□ 0.24
HLA-DQB2-231ENST00000435145 H0Y3Z8 333 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 M0QYT0 321 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CLDN5O00501 218 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DYNC1LI2O43237 492 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FYNP06241 537 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SERPINA6P08185 405 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PTPN1P18031 435 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ABL2P42684 1182 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MAGEA12P43365 314 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 AIF1P55008 147 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SESN2P58004 480 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SCAPQ12770 1279 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TUBB3Q13509 450 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 BLMHQ13867 455 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FRG1Q14331 258 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 MFSD10Q14728 455 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CLEC20AQ6ZU45 233 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NTAN1Q96AB6 310 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GORASP1Q9BQQ3 440 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 STN1Q9H668 368 aaKnown RBP16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PIGVQ9NUD9 493 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 STOML1Q9UBI4 398 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DCDC2Q9UHG0 476 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 TAGLN3Q9UI15 199 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PLA2G4CQ9UP65 541 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SORCS3Q9UPU3 1222 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 IPPQ9Y573 584 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RAD54BQ9Y620 910 aa16.52■□□□□ 0.23
HLA-DQB2-231ENST00000435145 F5H423 210 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PTGESO14684 152 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ITGA2BP08514 1039 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ATP6V1C1P21283 382 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NDUFV1P49821 464 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ZCCHC23Q6ZST2 131 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ARHGAP24Q8N264 748 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 RNF169Q8NCN4 708 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 WDR60Q8WVS4 1066 aa16.51■□□□□ 0.23
HLA-DQB2-231ENST00000435145 B2RBV5 119 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 C9IYK1 514 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 EEF2KO00418 725 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PSMG1O95456 288 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PROCP04070 461 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 ADRA1BP35368 520 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PGM1P36871 562 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 HCAR3P49019 387 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 GJA9P57773 515 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 DEUP1Q05D60 604 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PCLAFQ15004 111 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 SPANXN3Q5MJ09 141 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 KIAA0319Q5VV43 1072 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 C16orf46Q6P387 395 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 HFE2Q6ZVN8 426 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 NETO2Q8NC67 525 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 CEP41Q9BYV8 373 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 LRRC4Q9HBW1 653 aa16.5■□□□□ 0.23
HLA-DQB2-231ENST00000435145 WDR6Q9NNW5 1121 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms