RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ZNF408Q9H9D4 720 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 TXNDC16Q9P2K2 825 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GJD2Q9UKL4 321 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 TRHDEQ9UKU6 1024 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 PTCH2Q9Y6C5 1203 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 HMX2A2RU54 273 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 CAPN9O14815 690 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 PSMD3O43242 534 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 ADCY6O43306 1168 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 CREB3O43889 395 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 MAGEC1O60732 1142 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 RPSAP08865 295 aaKnown RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 TPBGLP0DKB5 382 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 MX2P20592 715 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 GRK2P25098 689 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 PSMB4P28070 264 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 ADRA1BP35368 520 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 GCKP35557 465 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 GP5P40197 560 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 GRIA1P42261 906 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 TKTL1P51854 596 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 SESN2P58004 480 aaPredicted RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 CRYMQ14894 314 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 MORN1Q5T089 497 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 ZNF618Q5T7W0 954 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 OTUD1Q5VV17 481 aaPredicted RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 ITPRIPL1Q6GPH6 555 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 CLEC20AQ6ZU45 233 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 PID1Q7Z2X4 250 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 RASSF3Q86WH2 238 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 TMPRSS6Q8IU80 811 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 ARID3BQ8IVW6 561 aaPredicted RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 WDR75Q8IWA0 830 aaKnown RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 LRRN4Q8WUT4 740 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 PGAP3Q96FM1 320 aaPredicted RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
CD44-210ENST00000434472 VAT1Q99536 393 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 CPNE1Q99829 537 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 MAGEB5Q9BZ81 275 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 PRDM12Q9H4Q4 367 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 CNGB3Q9NQW8 809 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 SEPT10Q9P0V9 454 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 STOML1Q9UBI4 398 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 MFHAS1Q9Y4C4 1052 aa10.71□□□□□ -0.69
CD44-210ENST00000434472 TRIP11Q15643 1979 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 MAGEB16A2A368 324 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SPECC1L-ADORA2AF8WAN1 911 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 M0QZ92 97 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TREHO43280 583 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 ZNF865P0CJ78 1059 aaPredicted RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 RARBP10826 455 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 DNAJB2P25686 324 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 NPY2RP49146 381 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 CDK7P50613 346 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 DAOAP59103 153 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TPI1P60174 286 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 PDE1BQ01064 536 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 NME3Q13232 169 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TAF11Q15544 211 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 DNAL1Q4LDG9 190 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 FASTKD1Q53R41 847 aaKnown RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 MDH1BQ5I0G3 518 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 C6orf163Q5TEZ5 329 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SPRYD7Q5W111 196 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 WSCD1Q658N2 575 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TWF2Q6IBS0 349 aaKnown RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.7
CD44-210ENST00000434472 ZNF567Q8N184 647 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TEX9Q8N6V9 391 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SLC7A14Q8TBB6 771 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 TMEM40Q8WWA1 233 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 IRGQQ8WZA9 623 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 PGBD4Q96DM1 585 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SENP8Q96LD8 212 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 MIPEPQ99797 713 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 MECRQ9BV79 373 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 DENND2DQ9H6A0 471 aaPredicted RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 GOLGA2P5Q9HBQ8 144 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 FBXO6Q9NRD1 293 aaPredicted RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 BFARQ9NZS9 450 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 ZFATQ9P243 1243 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 KLHL8Q9P2G9 620 aaPredicted RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 PPARGC1AQ9UBK2 798 aaKnown RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 TAGLN3Q9UI15 199 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 FBXW11Q9UKB1 542 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 HBS1LQ9Y450 684 aaKnown RBP10.7□□□□□ -0.7
CD44-210ENST00000434472 LRRC42Q9Y546 428 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 SCN4AP35499 1836 aa10.7□□□□□ -0.7
CD44-210ENST00000434472 CCDC195A0A1B0GUA6 201 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CAPN14A8MX76 684 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 CLDN5O00501 218 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 TPP1O14773 563 aa10.69□□□□□ -0.7
CD44-210ENST00000434472 LIN7AO14910 233 aaPredicted RBP10.69□□□□□ -0.7
CD44-210ENST00000434472 PLIN3O60664 434 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms