RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 BEND5Q7L4P6 421 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 NETO2Q8NC67 525 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF398Q8TD17 642 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 UGT1A7Q9HAW7 530 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 UGT1A10Q9HAW8 530 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 UGT1A8Q9HAW9 530 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 COX16Q9P0S2 106 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 GGT7Q9UJ14 662 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 IKBKGQ9Y6K9 419 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 PLXNA3P51805 1871 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 MYO16Q9Y6X6 1858 aa14.37□□□□□ -0.11
HOXC4-202ENST00000430889 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 I3L4J1 428 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CCNB1P14635 433 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 PSMB4P28070 264 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CCND3P30281 292 aaPredicted RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 SKIV2L2P42285 1042 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 BRCC3P46736 316 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF135P52742 658 aaPredicted RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 PPIDQ08752 370 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 TUSC3Q13454 348 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CYB5D1Q6P9G0 228 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CDHR3Q6ZTQ4 885 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 MARK2Q7KZI7 788 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 SUGP1Q8IWZ8 645 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 NPWQ8N729 165 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 PDCD7Q8N8D1 485 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 OR10T2Q8NGX3 314 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 ADAM32Q8TC27 787 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 MTBPQ96DY7 904 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 COLEC11Q9BWP8 271 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 KANSL3Q9P2N6 904 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 NEU3Q9UQ49 428 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 SQORQ9Y6N5 450 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 USH1CQ9Y6N9 552 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CAPN9O14815 690 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 KLF11O14901 512 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 MGRN1O60291 552 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 KRT37O76014 449 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 STK10O94804 968 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 F9P00740 461 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 NCAM1P13591 858 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 PTPN3P26045 913 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 ELF3P78545 371 aaPredicted RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 SARNPP82979 210 aaKnown RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 AP1B1Q10567 949 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 LRRTM3Q86VH5 581 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 CTAGE3PQ8IX95 158 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 KLHDC8BQ8IXV7 354 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 ZSCAN18Q8TBC5 510 aaPredicted RBP14.36□□□□□ -0.11
HOXC4-202ENST00000430889 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 SUSD3Q96L08 255 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 UROC1Q96N76 676 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 ECT2Q9H8V3 914 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 DSEQ9UL01 958 aa14.36□□□□□ -0.11
HOXC4-202ENST00000430889 WDR27A2RRH5 827 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TMEM88BA6NKF7 163 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 SDR42E2A6NKP2 422 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 POMCP01189 267 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TYMPP19971 482 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 SERPINB9P50453 376 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TPI1P60174 286 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 GALNT2Q10471 571 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 PLEKHG4Q58EX7 1191 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 SPDYAQ5MJ70 313 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TRAF7Q6Q0C0 670 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TAC4Q86UU9 113 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 HDAC11Q96DB2 347 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 PGBD4Q96DM1 585 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 FAM111AQ96PZ2 611 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 SRPK1Q96SB4 655 aaKnown RBP14.35□□□□□ -0.11
HOXC4-202ENST00000430889 TMEM209Q96SK2 561 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 ADAM2Q99965 735 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 PLLPQ9Y342 182 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 MAD1L1Q9Y6D9 718 aa14.35□□□□□ -0.11
HOXC4-202ENST00000430889 C2CD2LO14523 706 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 NCAM2O15394 837 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 B3GAT3O94766 335 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 ITGB1P05556 798 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 SKIP12755 728 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 BDNFP23560 247 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 YY1P25490 414 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 SERPINB4P48594 390 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 NAB1Q13506 487 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 DQX1Q8TE96 717 aaKnown RBP14.34□□□□□ -0.11
HOXC4-202ENST00000430889 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 CEP41Q9BYV8 373 aa14.34□□□□□ -0.11
HOXC4-202ENST00000430889 OSBPL2Q9H1P3 480 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms