RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CD101Q93033 1021 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ASIC4Q96FT7 647 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 RBM41Q96IZ5 413 aaKnown RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 PRICKLE1Q96MT3 831 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 RPRD1AQ96P16 312 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 LRRC3BQ96PB8 259 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 PRMT1Q99873 361 aaKnown RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 FAM83CQ9BQN1 747 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ZNF670Q9BS34 389 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 PLA2G2FQ9BZM2 168 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 CATSPERBQ9H7T0 1116 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ANLNQ9NQW6 1124 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 SPHK2Q9NRA0 654 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 DONSONQ9NYP3 566 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 MARK1Q9P0L2 795 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 RCOR3Q9P2K3 495 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 OR12D3Q9UGF7 316 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 DUSP12Q9UNI6 340 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 SORCS3Q9UPU3 1222 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 HYOU1Q9Y4L1 999 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 LRRD1A4D1F6 860 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TCAF2A6NFQ2 919 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 I6L893 689 aaPredicted RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 EEF2KO00418 725 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 HOXC11O43248 304 aaPredicted RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 LRIG2O94898 1065 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 SRFP11831 508 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 BMP1P13497 986 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 HOXC13P31276 330 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 DEKP35659 375 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 CETN2P41208 172 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 MLLT6P55198 1093 aaPredicted RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 RWDD2BP57060 319 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 AMPD2Q01433 879 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 SEMA3BQ13214 749 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 RUNX3Q13761 415 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 AUHQ13825 339 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 DHCR24Q15392 516 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ANO4Q32M45 955 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ITPRIPL2Q3MIP1 535 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ZNF569Q5MCW4 686 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 MANEALQ5VSG8 457 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TRIM68Q6AZZ1 485 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 FBXL22Q6P050 247 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TPGS1Q6ZTW0 290 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 CHST9Q7L1S5 443 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 KCTD6Q8NC69 237 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 DDI1Q8WTU0 396 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 EXOC4Q96A65 974 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 MSANTD3Q96H12 275 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ZFYVE19Q96K21 471 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 RPP25Q9BUL9 199 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 BBS2Q9BXC9 721 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ZYG11BQ9C0D3 744 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 EBF3Q9H4W6 596 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 ECT2Q9H8V3 914 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TRPV5Q9NQA5 729 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 HPS4Q9NQG7 708 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TMPRSS4Q9NRS4 437 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 KLHL11Q9NVR0 708 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 STIM2Q9P246 746 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 PPARGC1AQ9UBK2 798 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 DOCK4Q8N1I0 1966 aa11.36□□□□□ -0.59
CHD4-202ENST00000430771 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
CHD4-202ENST00000430771 IGLV3-10A0A075B6K4 115 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 GOLGA6L7A0A1B0GV03 622 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.35□□□□□ -0.59
CHD4-202ENST00000430771 ZNF487B1APH4 448 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 ARNTLO00327 626 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 GFRA2O00451 464 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 DAPK3O43293 454 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 TSPAN3O60637 253 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 SRGAP2O75044 1071 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 ARSAP15289 507 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 EPHB2P29323 1055 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 CDH4P55283 916 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 GNG11P61952 73 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 CDH18Q13634 790 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 RPS6KA1Q15418 735 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 CA9Q16790 459 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 C5orf22Q49AR2 442 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 LY6G5CQ5SRR4 150 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 SEL1L2Q5TEA6 688 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 TXNRD3NBQ6F5E7 133 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 RWDD4Q6NW29 188 aaKnown RBP11.35□□□□□ -0.59
CHD4-202ENST00000430771 RFWD3Q6PCD5 774 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 ZSCAN30Q86W11 494 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 CCDC50Q8IVM0 306 aa11.35□□□□□ -0.59
CHD4-202ENST00000430771 MFN1Q8IWA4 741 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms