RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF677Q86XU0 584 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 ZNF397Q8NF99 534 aaPredicted RBP17.61■□□□□ 0.41
UBE3D-204ENST00000430071 DQX1Q8TE96 717 aaKnown RBP17.61■□□□□ 0.41
UBE3D-204ENST00000430071 RTKNQ9BST9 563 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 SYT11Q9BT88 431 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 TMEM74BQ9NUR3 256 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 PCDHGA5Q9Y5G8 931 aa17.61■□□□□ 0.41
UBE3D-204ENST00000430071 FAM170AA1A519 330 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 NCAM1P13591 858 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 HARS2P49590 506 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 PDCLQ13371 301 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 FAM133BQ5BKY9 247 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 TRMT11Q7Z4G4 463 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 C12orf50Q8NA57 414 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 C1orf131Q8NDD1 294 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 STK32AQ8WU08 396 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 SYN2Q92777 582 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 FCRL2Q96LA5 508 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 PCDHB18PQ96TA0 734 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 THAP10Q9P2Z0 257 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 XPO7Q9UIA9 1087 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 STOML2Q9UJZ1 356 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 TP53BP1Q12888 1972 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 PCDH15Q96QU1 1955 aa17.6■□□□□ 0.41
UBE3D-204ENST00000430071 ATXN2Q99700 1313 aaKnown RBP17.6■□□□□ 0.41
UBE3D-204ENST00000430071 DOCK4Q8N1I0 1966 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CABIN1Q9Y6J0 2220 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 IGHV1OR15-9A0A0B4J2B8 117 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 TM4SF5O14894 197 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 FBXO21O94952 628 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 ADCY5O95622 1261 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CYBBP04839 570 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 SKILP12757 684 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 HLA-FP30511 346 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CDH5P33151 784 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-204ENST00000430071 PRKCIP41743 596 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 TBX4P57082 545 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 NOMO3P69849 1222 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 ZNF234Q14588 700 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 FUT11Q495W5 492 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 MPPE1Q53F39 396 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 ADGRF1Q5T601 910 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 HGSNATQ68CP4 663 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 TAC4Q86UU9 113 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 PIGKQ92643 395 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 FAM149B1Q96BN6 582 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 TMA16Q96EY4 203 aaKnown RBP17.59■□□□□ 0.41
UBE3D-204ENST00000430071 MRGPRX1Q96LB2 322 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 AGPAT1Q99943 283 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 NUCKS1Q9H1E3 243 aaKnown RBP17.59■□□□□ 0.41
UBE3D-204ENST00000430071 PDCL3Q9H2J4 239 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 HAUS4Q9H6D7 363 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 ELOVL2Q9NXB9 296 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CYP8B1Q9UNU6 501 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 CHD8Q9HCK8 2581 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 TMEM131Q92545 1883 aa17.59■□□□□ 0.41
UBE3D-204ENST00000430071 MAP3K13O43283 966 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ACSL4O60488 711 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 MFAP3LO75121 409 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 CYP1A1P04798 512 aaPredicted RBP17.58■□□□□ 0.4
UBE3D-204ENST00000430071 HLA-EP13747 358 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 PRKCHP24723 683 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 IRX4P78413 519 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 FOXK2Q01167 660 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ENPP2Q13822 863 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ARID5BQ14865 1188 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 STPG1Q5TH74 334 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 PIK3R6Q5UE93 754 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ZNF571Q7Z3V5 609 aaPredicted RBP17.58■□□□□ 0.4
UBE3D-204ENST00000430071 CYP2U1Q7Z449 544 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ANKS1BQ7Z6G8 1248 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 TMEM110Q86TL2 294 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ZNF366Q8N895 744 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 TMEM35BQ8NCS4 154 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 CYB5D2Q8WUJ1 264 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 SLC39A13Q96H72 371 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 PRICKLE1Q96MT3 831 aaPredicted RBP17.58■□□□□ 0.4
UBE3D-204ENST00000430071 CPXM1Q96SM3 734 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 DNAJC7Q99615 494 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 MKRN2Q9H000 416 aaKnown RBP17.58■□□□□ 0.4
UBE3D-204ENST00000430071 FSCN3Q9NQT6 498 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ABCB8Q9NUT2 735 aa17.58■□□□□ 0.4
UBE3D-204ENST00000430071 ACACBO00763 2458 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 LNP1A1A4G5 178 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 TBL1XO60907 577 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 LSM8O95777 96 aaKnown RBP17.57■□□□□ 0.4
UBE3D-204ENST00000430071 ITPKAP23677 461 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 HNRNPH3P31942 346 aaKnown RBP17.57■□□□□ 0.4
UBE3D-204ENST00000430071 CD70P32970 193 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 ADKP55263 362 aaKnown RBP17.57■□□□□ 0.4
UBE3D-204ENST00000430071 KLHL30Q0D2K2 578 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 PTPN20Q4JDL3 420 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 NAA35Q5VZE5 725 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 SDE2Q6IQ49 451 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 WDR59Q6PJI9 974 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 SLC41A1Q8IVJ1 513 aa17.57■□□□□ 0.4
UBE3D-204ENST00000430071 OR8K1Q8NGG5 319 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms