RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 TAC4Q86UU9 113 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 FAM124AQ86V42 546 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 CFAP52Q8N1V2 620 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 PRCCQ92733 491 aaPredicted RBP17.76■□□□□ 0.43
CPSF4-203ENST00000430038 AZIN2Q96A70 460 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 SIX2Q9NPC8 291 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 PRSS16Q9NQE7 514 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 ST7Q9NRC1 585 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 RWDD2AQ9UIY3 292 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 ZZEF1O43149 2961 aa17.76■□□□□ 0.43
CPSF4-203ENST00000430038 NYNRINQ9P2P1 1898 aaKnown RBP17.75■□□□□ 0.43
CPSF4-203ENST00000430038 METTL12A8MUP2 240 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 C1QTNF9BB2RNN3 333 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 E5RJQ4 531 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 C1QTNF9P0C862 333 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 CTSOP43234 321 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-203ENST00000430038 NUMBP49757 651 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 PLEKHG6Q3KR16 790 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
CPSF4-203ENST00000430038 DCAF12L1Q5VU92 463 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 TMEM110Q86TL2 294 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 OR2T3Q8NH03 318 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 MRGPRX3Q96LB0 322 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 C6orf106Q9H6K1 298 aaPredicted RBP17.75■□□□□ 0.43
CPSF4-203ENST00000430038 IL21RQ9HBE5 538 aa17.75■□□□□ 0.43
CPSF4-203ENST00000430038 PLXNA2O75051 1894 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 TP53BP1Q12888 1972 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 UPK3BL1B0FP48 263 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 UPK3BL2E5RIL1 263 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 THAP12O43422 761 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 IGLV3-25P01717 112 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 DLDP09622 509 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 PNMA6AP0CW24 399 aaPredicted RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 DPP6P42658 865 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 RPS14P62263 151 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 ARHGAP44Q17R89 818 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 DCAF6Q58WW2 860 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 ZC3H12AQ5D1E8 599 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 MS4A13Q5J8X5 152 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 MPP7Q5T2T1 576 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 NUGGCQ68CJ6 796 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 CREBRFQ8IUR6 639 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 UNC45BQ8IWX7 931 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 ZCCHC9Q8N567 271 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 FIBINQ8TAL6 211 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 WFIKKN2Q8TEU8 576 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 STK32AQ8WU08 396 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 FOXJ1Q92949 421 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 TTC17Q96AE7 1141 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 FAM149B1Q96BN6 582 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 DNAAF2Q9NVR5 837 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 EIF2B4Q9UI10 523 aaKnown RBP17.74■□□□□ 0.43
CPSF4-203ENST00000430038 TLR6Q9Y2C9 796 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 PLXNB3Q9ULL4 1909 aa17.74■□□□□ 0.43
CPSF4-203ENST00000430038 MOCS2O96007 188 aaPredicted RBP17.73■□□□□ 0.43
CPSF4-203ENST00000430038 PON1P27169 355 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 GNA15P30679 374 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 SLC11A2P49281 568 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 ZNF445P59923 1031 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 GRIK2Q13002 908 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 APCDD1Q8J025 514 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 AHI1Q8N157 1196 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 CADM4Q8NFZ8 388 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 CPXM1Q96SM3 734 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 NUP58Q9BVL2 599 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 SCNM1Q9BWG6 230 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 ADAM33Q9BZ11 813 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 MIR1-1HGQ9H1L0 117 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
CPSF4-203ENST00000430038 CHD6Q8TD26 2715 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 IRAK2O43187 625 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 SH3BP5O60239 455 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 OPHN1O60890 802 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 CSKP41240 450 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 UBE2HP62256 183 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 ARID5AQ03989 594 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 PDCLQ13371 301 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 WDR45BQ5MNZ6 344 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 SYCP2LQ5T4T6 812 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 PASD1Q8IV76 773 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 MFN1Q8IWA4 741 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 CARNMT1Q8N4J0 409 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 SHC3Q92529 594 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 SERPINB11Q96P15 392 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 ORAI3Q9BRQ5 295 aa17.72■□□□□ 0.43
CPSF4-203ENST00000430038 MEI4A8MW99 385 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 FOXN3O00409 490 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 HYAL3O43820 417 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 TRUB2O95900 331 aaKnown RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 ACADMP11310 421 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 POLR2EP19388 210 aaKnown RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 OXTRP30559 389 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 CLCN1P35523 988 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 USP8P40818 1118 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 ACADSBP45954 432 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 ATXN3P54252 364 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 YWHAZP63104 245 aaKnown RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 SIM1P81133 766 aaPredicted RBP17.71■□□□□ 0.43
CPSF4-203ENST00000430038 NNTQ13423 1086 aa17.71■□□□□ 0.43
CPSF4-203ENST00000430038 MEA1Q16626 185 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms