RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SLC7A14Q8TBB6 771 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC2A14Q8TDB8 520 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TFB1MQ8WVM0 346 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 PARK7Q99497 189 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 XYLT2Q9H1B5 865 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TSPYL2Q9H2G4 693 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 NRDE2Q9H7Z3 1164 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 MRGBPQ9NV56 204 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CACNG4Q9UBN1 327 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 FARP1Q9Y4F1 1045 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 CLDN5O00501 218 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CILPO75339 1184 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC4A1P02730 911 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 GPD2P43304 727 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CCDC142Q17RM4 750 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 HSP90AA5PQ58FG0 334 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 DRICH1Q6PGQ1 229 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TMPRSS6Q8IU80 811 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 RYBPQ8N488 228 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 GALNT4Q8N4A0 578 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 USP13Q92995 863 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 CELF6Q96J87 481 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 MPP4Q96JB8 637 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 GPR20Q99678 358 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TAGLN3Q9UI15 199 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PLA2G4CQ9UP65 541 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 AK5Q9Y6K8 562 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 RNF103O00237 685 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PAPSS1O43252 624 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 HUS1O60921 280 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SPAG6O75602 509 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 MOCS2O96007 188 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 ATP6V1B1P15313 513 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 ZNF16P17020 682 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 GNL1P36915 607 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 ADCYAP1R1P41586 468 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CD151P48509 253 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 NUDT2P50583 147 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 COPAP53621 1224 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC12A2P55011 1212 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 CACNB2Q08289 660 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 ADIGQ0VDE8 80 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 BLMHQ13867 455 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PDCD2Q16342 344 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC10A6Q3KNW5 377 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 LPCAT4Q643R3 524 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TWF2Q6IBS0 349 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 DEFB106AQ8N104 65 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 BEST2Q8NFU1 509 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 OR52K1Q8NGK4 314 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 FAM136AQ96C01 138 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TMA16Q96EY4 203 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 NIFKQ9BYG3 293 aaKnown RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 RNF208Q9H0X6 261 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 ATXN3LQ9H3M9 355 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TASP1Q9H6P5 420 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 C20orf96Q9NUD7 363 aaPredicted RBP8.28□□□□□ -1.08
HPS4-205ENST00000429411 GTSE1Q9NYZ3 720 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 TUBGCP4Q9UGJ1 667 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 PLLPQ9Y342 182 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 NUMBLQ9Y6R0 609 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 QSER1Q2KHR3 1735 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 FER1L6Q2WGJ9 1857 aa8.28□□□□□ -1.08
HPS4-205ENST00000429411 NRXN2Q9P2S2 1712 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 ITM2AO43736 263 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 IQCF3P0C7M6 154 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 MX2P20592 715 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 FLT3LGP49771 235 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 TUBP50607 506 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 NEK3P51956 506 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 OAZ1P54368 228 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 TAGLNQ01995 201 aaKnown RBP8.27□□□□□ -1.08
HPS4-205ENST00000429411 MMEL1Q495T6 779 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 LAYNQ6UX15 382 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 STRA8Q7Z7C7 330 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 C10orf107Q8IVU9 208 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.27□□□□□ -1.08
HPS4-205ENST00000429411 ULK2Q8IYT8 1036 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 CCDC185Q8N715 623 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 HTR3CQ8WXA8 447 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 EDEM1Q92611 657 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 SH3GL3Q99963 347 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 SYT15Q9BQS2 421 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 WDR83Q9BRX9 315 aaKnown RBP8.27□□□□□ -1.08
HPS4-205ENST00000429411 PIDD1Q9HB75 910 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 BFARQ9NZS9 450 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 PCDHGC3Q9UN70 934 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 C2CD2Q9Y426 696 aa8.27□□□□□ -1.08
HPS4-205ENST00000429411 SBF1O95248 1867 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 SDR42E2A6NKP2 422 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 CHADO15335 359 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PHGDHO43175 533 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 DYNC1LI2O43237 492 aaPredicted RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 HNRNPCL1O60812 293 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 RALBP11234 206 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms