RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SNUPNO95149 360 aaKnown RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 ORC1Q13415 861 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 C11orf88Q6PI97 169 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 KYAT3Q6YP21 454 aaKnown RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 ACOX2Q99424 681 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 PACSIN1Q9BY11 444 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SHCBP1LQ9BZQ2 653 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 NCKAP1Q9Y2A7 1128 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 TRPV2Q9Y5S1 764 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SF3B1O75533 1304 aaKnown RBP eCLIP13.07□□□□□ -0.32
LDB3-205ENST00000429277 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 CENPXA8MT69 81 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 DLGAP3O95886 979 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 ANXA6P08133 673 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 PBLDP30039 288 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 OR1E1P30953 314 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SLC6A3Q01959 620 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 CREMQ03060 361 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 CYP2A13Q16696 494 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 PAGE2BQ5JRK9 111 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 OLFML2BQ68BL8 750 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 UROC1Q96N76 676 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 OSGEPL1Q9H4B0 414 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 CAPN10Q9HC96 672 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 EVA1BQ9NVM1 165 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SNTG2Q9NY99 539 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 POLR1AO95602 1720 aaPredicted RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 TRAF2Q12933 501 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 DDR2Q16832 855 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 TBCELQ5QJ74 424 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 C9orf131Q5VYM1 1079 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
LDB3-205ENST00000429277 FAM45AQ8TCE6 357 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SERAC1Q96JX3 654 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 SNCAIPQ9Y6H5 919 aa13.07□□□□□ -0.32
LDB3-205ENST00000429277 RIPK2O43353 540 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 MYL4P12829 197 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 HNRNPH1P31943 449 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 SLC1A6P48664 564 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 MFSD10Q14728 455 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TMEM132CQ8N3T6 1108 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 EMC1Q8N766 993 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TMEM134Q9H6X4 195 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 OSGEPQ9NPF4 335 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 CCNT2O60583 730 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 KLHL41O60662 606 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 PCDH8O95206 1070 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 APOC2P02655 101 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 BGNP21810 368 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 POU1F1P28069 291 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 HPCAL1P37235 193 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 RFX3P48380 749 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TUBP50607 506 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TRMT11Q7Z4G4 463 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 MTDHQ86UE4 582 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 LRRC49Q8IUZ0 686 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TBL1YQ9BQ87 522 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 SLC25A23Q9BV35 468 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 POPDC2Q9HBU9 364 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 RGS14O43566 566 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 BAIAP3O94812 1187 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 CLPTM1O96005 669 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 VEGFAP15692 232 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 H2AFXP16104 143 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 ALDH5A1P51649 535 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 ADIGQ0VDE8 80 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 EPS8Q12929 822 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 PWP1Q13610 501 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 N4BP2L1Q5TBK1 243 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 SYTL1Q8IYJ3 562 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 MCCC1Q96RQ3 725 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 ZCWPW1Q9H0M4 648 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 DYTNA2CJ06 578 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 TBKBP1A7MCY6 615 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 CYP3A4P08684 503 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 ALADP13716 330 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 BCL2L1Q07817 233 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 ZNF655Q8N720 491 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 APOL2Q9BQE5 337 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 IDI2Q9BXS1 227 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
LDB3-205ENST00000429277 UBA2Q9UBT2 640 aaPredicted RBP13.06□□□□□ -0.32
LDB3-205ENST00000429277 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms