RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TUBP50607 506 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 SGSHP51688 502 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 AIF1P55008 147 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 VCPP55072 806 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 EIF3EP60228 445 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 GUCY2DQ02846 1103 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 NNTQ13423 1086 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 KCNC3Q14003 757 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 TEAD2Q15562 447 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ARL13BQ3SXY8 428 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 FBXO38Q6PIJ6 1188 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 VSIG1Q86XK7 387 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 MAP7D3Q8IWC1 876 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ZNF276Q8N554 614 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 GPR161Q8N6U8 529 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 MAB21L3Q8N8X9 362 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 DEPDC1BQ8WUY9 529 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 MAIP1Q8WWC4 291 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 IGSF8Q969P0 613 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 P2RY11Q96G91 374 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 CCDC114Q96M63 670 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 HAPLN3Q96S86 360 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 PRMT1Q99873 361 aaKnown RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 TMEM121Q9BTD3 319 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 APOL5Q9BWW9 433 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 KLC2Q9H0B6 622 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 DPH5Q9H2P9 285 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 IGFLR1Q9H665 355 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 TLE6Q9H808 572 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.17□□□□□ -0.94
SMC6-204ENST00000428868 DTLQ9NZJ0 730 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 UXTQ9UBK9 157 aaPredicted RBP9.17□□□□□ -0.94
SMC6-204ENST00000428868 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 VANGL2Q9ULK5 521 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 NEU2Q9Y3R4 380 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 ASB3Q9Y575 518 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 HEY1Q9Y5J3 304 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 BRWD1Q9NSI6 2320 aa9.17□□□□□ -0.94
SMC6-204ENST00000428868 CCDC195A0A1B0GUA6 201 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 DAPK3O43293 454 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 GREM1O60565 184 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 CNTN5O94779 1100 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 APOEP02649 317 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 RBP3P10745 1247 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 CEBPBP17676 345 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 TGM2P21980 687 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ECHS1P30084 290 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 CORO1AP31146 461 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 CARSP49589 748 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 VPS41P49754 854 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 NUMBP49757 651 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 EPHA5P54756 1037 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 RING1Q06587 406 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 HYAL1Q12794 435 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 BYSLQ13895 437 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 TFDP2Q14188 446 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 PAFAH1B3Q15102 231 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 CLUL1Q15846 466 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ALFQ53S48 1182 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 TCEAL5Q5H9L2 206 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 PRSS36Q5K4E3 855 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 PDE12Q6L8Q7 609 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 RFWD3Q6PCD5 774 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 KLHDC10Q6PID8 442 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 TMC5Q6UXY8 1006 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ARHGAP36Q6ZRI8 547 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 GRASPQ7Z6J2 395 aaPredicted RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 DENND1CQ8IV53 801 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 CCDC105Q8IYK2 499 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ATP6V0D2Q8N8Y2 350 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ING5Q8WYH8 240 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ANKRD7Q92527 254 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 NKD2Q969F2 451 aaPredicted RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 MRPL38Q96DV4 380 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 CELF6Q96J87 481 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 PRICKLE1Q96MT3 831 aaPredicted RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 OLFM3Q96PB7 478 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 EPAS1Q99814 870 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 MAK16Q9BXY0 300 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 SLC46A2Q9BY10 475 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 NACA2Q9H009 215 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ATXN3LQ9H3M9 355 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 GDF3Q9NR23 364 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 ASAH2Q9NR71 780 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 STIM2Q9P246 746 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 RCOR3Q9P2K3 495 aaPredicted RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 RAB21Q9UL25 225 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 CCL26Q9Y258 94 aa9.16□□□□□ -0.94
SMC6-204ENST00000428868 HBS1LQ9Y450 684 aaKnown RBP9.16□□□□□ -0.94
SMC6-204ENST00000428868 CPQQ9Y646 472 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms