RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 UNC93AQ86WB7 457 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 JAMLQ86YT9 394 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 B3GALNT2Q8NCR0 500 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 FBXO25Q8TCJ0 367 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CTNNBL1Q8WYA6 563 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 PLVAPQ9BX97 442 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 SEMA4AQ9H3S1 761 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CNTN6Q9UQ52 1028 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CHMP2BQ9UQN3 213 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PATJQ8NI35 1801 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TBX10O75333 385 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 EFEMP2O95967 443 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CPB1P15086 417 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 DNAJB1P25685 340 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PCSK1P29120 753 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ADORA2BP29275 332 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CHRNA3P32297 505 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PLTPP55058 493 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ERVK-21P61565 698 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TSPY1Q01534 308 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 DSG1Q02413 1049 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CLPPQ16740 277 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 SGO2Q562F6 1265 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 RSPO2Q6UXX9 243 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 B3GNT6Q6ZMB0 384 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ANKS3Q6ZW76 656 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TMC7Q7Z402 723 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 ADGRG6Q86SQ4 1221 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CROCCP3Q8IVE0 287 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 LNX1Q8TBB1 728 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 GDPD5Q8WTR4 605 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TFAP2BQ92481 460 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TIFAQ96CG3 184 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TNIP3Q96KP6 325 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TCF25Q9BQ70 676 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 BTBD10Q9BSF8 475 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 TRIM51Q9BSJ1 452 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 C11orf84Q9BUA3 381 aaPredicted RBP11.78□□□□□ -0.52
CECR3-201ENST00000428828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
CECR3-201ENST00000428828 ZBP1Q9H171 429 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 GTF3C4Q9UKN8 822 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CDH9Q9ULB4 789 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
CECR3-201ENST00000428828 MTCL1Q9Y4B5 1905 aaKnown RBP11.77□□□□□ -0.52
CECR3-201ENST00000428828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 MYBPHLA2RUH7 354 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 C5orf67F2Z3F1 127 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 H7C4K7 107 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 GRM6O15303 877 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 PHF2O75151 1096 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 OAZ2O95190 189 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 CFHP08603 1231 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 PTPN1P18031 435 aaKnown RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 CCNFP41002 786 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 PRKCIP41743 596 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 GSTM4Q03013 218 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 SF3A3Q12874 501 aaKnown RBP eCLIP11.77□□□□□ -0.53
CECR3-201ENST00000428828 GPM6BQ13491 265 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 LRRC14Q15048 493 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 ACSBG2Q5FVE4 666 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 PPP1R26Q5T8A7 1209 aaPredicted RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 ZNF571Q7Z3V5 609 aaPredicted RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 ARHGAP24Q8N264 748 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 STMN2Q93045 179 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 ART4Q93070 314 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 PGLYRP2Q96PD5 576 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 ZSWIM1Q9BR11 485 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 ACBD6Q9BR61 282 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 MED10Q9BTT4 135 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 RHOBTB2Q9BYZ6 727 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 TLR9Q9NR96 1032 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 MRPL17Q9NRX2 175 aaKnown RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 TMLHEQ9NVH6 421 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 FAIMQ9NVQ4 179 aa11.77□□□□□ -0.53
CECR3-201ENST00000428828 NOCTQ9UK39 431 aaKnown RBP11.77□□□□□ -0.53
CECR3-201ENST00000428828 EPOPA6NHQ4 379 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CLDN5O00501 218 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ADAM12O43184 909 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 VDRP11473 427 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 VARSP26640 1264 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 SERPINB3P29508 390 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PTGIRP43119 386 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ERVFC1P60507 584 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 SMAD3P84022 425 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms