RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 CCNA2P20248 432 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 GLDCP23378 1020 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 PIK3R1P27986 724 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 DSG3P32926 999 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TMBIM6P55061 237 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 EIF3EP60228 445 aaKnown RBP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 RPL10AP62906 217 aaKnown RBP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF846Q147U1 533 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ACMSDQ8TDX5 336 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 NACC1Q96RE7 527 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 PDZD7Q9H5P4 517 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 NOTOA8MTQ0 251 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 KMOO15229 486 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 BCL10O95999 233 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 APOEP02649 317 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ADRB2P07550 413 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ABCE1P61221 599 aaKnown RBP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 NOMO3P69849 1222 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 GNA12Q03113 381 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TRAF2Q12933 501 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 KCNJ11Q14654 390 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 SPCS2Q15005 226 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 IRAK1BP1Q5VVH5 260 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TTBK2Q6IQ55 1244 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 OR7G1Q8NGA0 311 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 DUS3LQ96G46 650 aaKnown RBP16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
C9orf3-206ENST00000428313 TISP43B9A030 160 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CHADO15335 359 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 GLRA3O75311 464 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 KRT75O95678 551 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CHEK2O96017 543 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CALCAP01258 141 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ENDOUP21128 410 aaKnown RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CNTFP26441 200 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 SELENBP1Q13228 472 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 HERC3Q15034 1050 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 VWA5B1Q5TIE3 1220 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 PPP4R4Q6NUP7 873 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 TTC23LQ6PF05 361 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF786Q8N393 782 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 PACRGLQ8N7B6 248 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 SMARCAD1Q9H4L7 1026 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 POU2F3Q9UKI9 436 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CDY2AQ9Y6F7 541 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 CDY1Q9Y6F8 540 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 TMEM191CA6NGB0 347 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 C6orf229H3BNL8 230 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 S100BP04271 92 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 TMEM191BP0C7N4 346 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ZNF182P17025 639 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 MAP4P27816 1152 aaKnown RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ADSLP30566 484 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 BTDP43251 543 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 PCLAFQ15004 111 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ELMOD1Q8N336 334 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 TAS1R2Q8TE23 839 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 SLC29A1Q99808 456 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
C9orf3-206ENST00000428313 EMCNQ9ULC0 261 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 ATP11BQ9Y2G3 1177 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 PCDHA1Q9Y5I3 950 aa16.48■□□□□ 0.23
C9orf3-206ENST00000428313 C1orf232A0A0U1RR37 186 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 HMX2A2RU54 273 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 CENPBD1B2RD01 187 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 TRIM38O00635 465 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 PLIN3O60664 434 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ENTPD3O75355 529 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 HSPA1LP34931 641 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 PKNOX1P55347 436 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 GADL1Q6ZQY3 521 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ZC3H7AQ8IWR0 971 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ANKFN1Q8N957 763 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 MFSD2AQ8NA29 543 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ATP6V1E2Q96A05 226 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ASB9Q96DX5 294 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 SEMA6AQ9H2E6 1030 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 NANOGQ9H9S0 305 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 MRPL40Q9NQ50 206 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 ZC3H7BQ9UGR2 993 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 SERPINA10Q9UK55 444 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 C3orf70A6NLC5 250 aaPredicted RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 GMNNO75496 209 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 JRKO75564 520 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 MYO1DO94832 1006 aa16.47■□□□□ 0.23
C9orf3-206ENST00000428313 POLR2BP30876 1174 aaKnown RBP16.47■□□□□ 0.23
C9orf3-206ENST00000428313 CRKLP46109 303 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms