RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ERVK-21P61565 698 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 HERVK_113P62684 666 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PLGLB1Q02325 96 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 MAD2L1Q13257 205 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 SLC39A12Q504Y0 691 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FAM171BQ6P995 826 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 METTL3Q86U44 580 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CBWD2Q8IUF1 395 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 EPHX4Q8IUS5 362 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZNF579Q8NAF0 562 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 WDR36Q8NI36 951 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 OSMRQ99650 979 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 RRN3Q9NYV6 651 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 APEX2Q9UBZ4 518 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 C2CD2Q9Y426 696 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 SESN1Q9Y6P5 492 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 SF3B1O75533 1304 aaKnown RBP eCLIP5.86□□□□□ -1.475e-6■■■■■ 112
HERC4-206ENST00000427635 SMIM31A0A1B0GVY4 71 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ADM5C9JUS6 153 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 H3BNH8 94 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TNFRSF10BO14763 440 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TRIM13O60858 407 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 LAG3P18627 525 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TYMPP19971 482 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 OR1E1P30953 314 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 STX3Q13277 289 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PDIA5Q14554 519 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ARMC12Q5T9G4 340 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 BRSK1Q8TDC3 778 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 UBE2E3Q969T4 207 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 SERPINB11Q96P15 392 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PGLYRP2Q96PD5 576 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FAIM2Q9BWQ8 316 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FRMD8Q9BZ67 464 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 ELOVL4Q9GZR5 314 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZNF624Q9P2J8 865 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 AP1M2Q9Y6Q5 423 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3DA0A087WVF3 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3IA0A087WXS9 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3EA0A087X179 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3KA0A087X1G2 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3FA6NER0 549 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3LB9A6J9 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 IL1BP01584 269 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3HP0C7X1 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CDC25CP30307 473 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 DEFA1P59665 94 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 DEFA3P59666 94 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CBFBQ13951 182 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 HIC1Q14526 733 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 UAP1L1Q3KQV9 507 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ARMC4Q5T2S8 1044 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3GQ6DHY5 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3CQ6IPX1 549 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZNF410Q86VK4 478 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TBC1D3Q8IZP1 549 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 OR10G6Q8NH81 332 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 RFFLQ8WZ73 363 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FICDQ9BVA6 458 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 KCTD10Q9H3F6 313 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PIGUQ9H490 435 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 NOX1Q9Y5S8 564 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ESYT3A0FGR9 886 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TMEM114B3SHH9 223 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZBTB14O43829 449 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 RAMP2O60895 175 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 AKT2P31751 481 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PPATQ06203 517 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 BOP1Q14137 746 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 TAS1R3Q7RTX0 852 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 HDDC2Q7Z4H3 204 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PTAR1Q7Z6K3 402 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 TREML1Q86YW5 311 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 RIT1Q92963 219 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 TGS1Q96RS0 853 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 SYT15Q9BQS2 421 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PI4K2AQ9BTU6 479 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PHF20Q9BVI0 1012 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PABPC3Q9H361 631 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 FBRSQ9HAH7 460 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ELL3Q9HB65 397 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 DCTN4Q9UJW0 460 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 DNMT3LQ9UJW3 386 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ZNF214Q9UL59 606 aaPredicted RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 ARL2BPQ9Y2Y0 163 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FAM25EA8MYX2 175 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 IGF2BP3O00425 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
HERC4-206ENST00000427635 OGTO15294 1046 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 CCNT2O60583 730 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 TAS2R50P59544 299 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 PURAQ00577 322 aaKnown RBP5.86□□□□□ -1.47
HERC4-206ENST00000427635 LYPLAL1Q5VWZ2 237 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FBXO42Q6P3S6 717 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 FBXO33Q7Z6M2 555 aa5.86□□□□□ -1.47
HERC4-206ENST00000427635 ACOT1Q86TX2 421 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms