RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TOGARAM2Q6ZUX3 1019 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CHSY1Q86X52 802 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CELF5Q8N6W0 485 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 MAP4K1Q92918 833 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 GTF3C6Q969F1 213 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 HMCESQ96FZ2 354 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 LTV1Q96GA3 475 aaPredicted RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 NELL2Q99435 816 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 ELAC2Q9BQ52 826 aaKnown RBP5.6□□□□□ -1.51
LINC00458-202ENST00000427299 TMEM79Q9BSE2 394 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CLSTN2Q9H4D0 955 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 DUSP22Q9NRW4 184 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 TPCN1Q9ULQ1 816 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 DAAM1Q9Y4D1 1078 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 CASZ1Q86V15 1759 aa5.6□□□□□ -1.51
LINC00458-202ENST00000427299 LRP6O75581 1613 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 KDM6AO15550 1401 aaPredicted RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 TNS3Q68CZ2 1445 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 MYH1P12882 1939 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 SLC16A3O15427 465 aaKnown RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 CCP110O43303 1012 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 AHSGP02765 367 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 EN2P19622 333 aaPredicted RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ARHGAP25P42331 645 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 PHKA1P46020 1223 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 CLCN2P51788 898 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ZRSR1Q15695 479 aaKnown RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 INO80DQ53TQ3 878 aaPredicted RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 PCID2Q5JVF3 399 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ERAP2Q6P179 960 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 SARM1Q6SZW1 724 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 PDCL2Q8N4E4 241 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 KBTBD7Q8WVZ9 684 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ZNF396Q96N95 335 aaPredicted RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 MACROD1Q9BQ69 325 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 APOL5Q9BWW9 433 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ADGRE3Q9BY15 652 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 TRIM54Q9BYV2 358 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 LRRC27Q9C0I9 530 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 NAT10Q9H0A0 1025 aaKnown RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 IL25Q9H293 177 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 SLAMF7Q9NQ25 335 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 PCDHA6Q9UN73 950 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
LINC00458-202ENST00000427299 ITGB4P16144 1822 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 A0A1B0GUL6 1792 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 PHLPP1O60346 1717 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 TOGARAM1Q9Y4F4 1720 aa5.59□□□□□ -1.51
LINC00458-202ENST00000427299 MEGF6O75095 1541 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 AKAP11Q9UKA4 1901 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ATRNO75882 1429 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 DLEC1Q9Y238 1755 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 A0A1W2PPL8 197 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 SMTNL1A8MU46 457 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TBX3O15119 743 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 INSIG1O15503 277 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 MGEA5O60502 916 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TLR5O60602 858 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 KINO60870 393 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 WDHD1O75717 1129 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 LARGE1O95461 756 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ONECUT2O95948 504 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 HDCP19113 662 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 CASP5P51878 434 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF134P52741 427 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 POLGP54098 1239 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 GSDMDP57764 484 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 FMO1Q01740 532 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ME3Q16798 604 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 KHDC1LQ5JSQ8 128 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 FAM83BQ5T0W9 1011 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TREML2Q5T2D2 321 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TMEM108Q6UXF1 575 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 USP37Q86T82 979 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 CEP57L1Q8IYX8 460 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 TTC5Q8N0Z6 440 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PNLDC1Q8NA58 520 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 KIAA1524Q8TCG1 905 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 BRIX1Q8TDN6 353 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PARD3BQ8TEW8 1205 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PPM1EQ8WY54 764 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 RAPGEF4Q8WZA2 1011 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 MSLNLQ96KJ4 702 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 C5orf34Q96MH7 638 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 FSD1LQ9BXM9 530 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 BICC1Q9H694 974 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PPCSQ9HAB8 311 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 SARS2Q9NP81 518 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ANO10Q9NW15 660 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 PIH1D1Q9NWS0 290 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 FNIP2Q9P278 1114 aa5.58□□□□□ -1.52
LINC00458-202ENST00000427299 CGNQ9P2M7 1197 aaKnown RBP5.58□□□□□ -1.52
LINC00458-202ENST00000427299 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms