RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SGTAO43765 313 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 KCNH1O95259 989 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 LCA5LO95447 670 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 ZNF7P17097 686 aaPredicted RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 NPY2RP49146 381 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 C16orf86Q6ZW13 317 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 FAM126BQ8IXS8 530 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 MCOLN3Q8TDD5 553 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 TMEM159Q96B96 161 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 MTMR12Q9C0I1 747 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 PHF11Q9UIL8 331 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 SSNA1O43805 119 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 HS6ST1O60243 411 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 CPSF4O95639 269 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 TAF13Q15543 124 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 CXXC5Q7LFL8 322 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 FBXO39Q8N4B4 442 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 SRBD1Q8N5C6 995 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 TRPV3Q8NET8 790 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 SPPL2AQ8TCT8 520 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 VAT1Q99536 393 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 DSN1Q9H410 356 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 TDRD3Q9H7E2 651 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 SPON1Q9HCB6 807 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 RPL26L1Q9UNX3 145 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 C15orf41Q9Y2V0 281 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 NPTXRO95502 500 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 HIST1H2ABP04908 130 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 ALADP13716 330 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 OLR1P78380 273 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 FMR1Q06787 632 aaKnown RBP eCLIP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 HIST3H2AQ7L7L0 130 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 HIST1H2ACQ93077 130 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 CHCHD6Q9BRQ6 235 aa14.75□□□□□ -0.05
PTPN13-203ENST00000427191 CDC42EP4Q9H3Q1 356 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 BAZ2BQ9UIF8 2168 aaKnown RBP14.75□□□□□ -0.05
PTPN13-203ENST00000427191 INPP4BO15327 924 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 MYBP10242 640 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 IL12AP29459 219 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 COPZ1P61923 177 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 RHAGQ02094 409 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 ELAVL2Q12926 359 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 RFX4Q33E94 735 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 TTC23Q5W5X9 447 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SLC9A7Q96T83 725 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 STAU1O95793 577 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CAPGP40121 348 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PLCL1Q15111 1095 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 QPRTQ15274 297 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 NECAB2Q7Z6G3 386 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CBWD2Q8IUF1 395 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SYTL1Q8IYJ3 562 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PIK3C3Q8NEB9 887 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PIGBQ92521 554 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 LINC00854A0A1B0GVQ3 168 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 ERI2A8K979 691 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PAX3P23760 479 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PTENP60484 403 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 TRAP1Q12931 704 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SLC44A2Q8IWA5 706 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 FNDC5Q8NAU1 212 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CCDC59Q9P031 241 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CDH9Q9ULB4 789 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 A0A087WZ62 844 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 A0A0X1KG70 313 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 HMBSP08397 361 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SERPINF2P08697 491 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 POLR2LP62875 67 aaKnown RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 EFCAB12Q6NXP0 572 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 AASDHPPTQ9NRN7 309 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 LRRC4BQ9NT99 713 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 NPHP3-ACAD11A0A0J9YXS1 232 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 ETS1P14921 441 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 PTSQ03393 145 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 TMEM63BQ5T3F8 832 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 LRRC17Q8N6Y2 441 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 FBXO32Q969P5 355 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 TEKT5Q96M29 485 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 AGPAT3Q9NRZ7 376 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 S100A6P06703 90 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 KLRC1P26715 233 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 IL2P60568 153 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 NET1Q7Z628 596 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 RERGLQ9H628 205 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 DKK3Q9UBP4 350 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 KPNA5O15131 536 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 AP1G2O75843 785 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CYP2A6P11509 494 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 SOX11P35716 441 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 GP5P40197 560 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 HALP42357 657 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 KLF6Q99612 283 aaPredicted RBP14.74□□□□□ -0.05
PTPN13-203ENST00000427191 EHD3Q9NZN3 535 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 ITGA11Q9UKX5 1188 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CHD1O14646 1710 aa14.74□□□□□ -0.05
PTPN13-203ENST00000427191 CXCR2P25025 360 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 ABRAXAS1Q6UWZ7 409 aa14.73□□□□□ -0.05
PTPN13-203ENST00000427191 RIPOR1Q6ZS17 1223 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms