RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PCSK7Q16549 785 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 C10orf107Q8IVU9 208 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 XYLT2Q9H1B5 865 aa13.77□□□□□ -0.21
USP42-203ENST00000426246 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 MAP2K5Q13163 448 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 TNFAIP8L3Q5GJ75 292 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 IYDQ6PHW0 289 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 HPS6Q86YV9 775 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 SLC7A14Q8TBB6 771 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 GCNAQ96QF7 691 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 STIP1P31948 543 aaKnown RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 ADIGQ0VDE8 80 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 NMD3Q96D46 503 aaKnown RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 FZD8Q9H461 694 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 PCDH18Q9HCL0 1135 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 NUP205Q92621 2012 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 ATP8B3O60423 1300 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 DYNC1LI2O43237 492 aaPredicted RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 LSM8O95777 96 aaKnown RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 APOEP02649 317 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 ABHD2P08910 425 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 CCNB1P14635 433 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 CCDC14Q49A88 953 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 RPS27LQ71UM5 84 aaKnown RBP13.76□□□□□ -0.21
USP42-203ENST00000426246 SLC44A1Q8WWI5 657 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 NFKBIZQ9BYH8 718 aa13.76□□□□□ -0.21
USP42-203ENST00000426246 GPD2P43304 727 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 NUDT2P50583 147 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 IRF5Q13568 498 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 ZNF460Q14592 562 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 CYTH1Q15438 398 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TAF1CQ15572 869 aaPredicted RBP13.75□□□□□ -0.21
USP42-203ENST00000426246 CCL14Q16627 93 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 ZNF484Q5JVG2 852 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 EXOC8Q8IYI6 725 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 SIX6OS1Q8N1H7 587 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 NRG4Q8WWG1 115 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TSNARE1Q96NA8 513 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 DFFAO00273 331 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 EPHA3P29320 983 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 RBP5P82980 135 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TAP1Q03518 808 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 DEFB106AQ8N104 65 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 NXF3Q9H4D5 531 aaKnown RBP13.75□□□□□ -0.21
USP42-203ENST00000426246 APPL1Q9UKG1 709 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TPST1O60507 370 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 FGFR3P22607 806 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 SLC1A6P48664 564 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 ZNF143P52747 638 aaPredicted RBP13.75□□□□□ -0.21
USP42-203ENST00000426246 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 OLFML2BQ68BL8 750 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TSHZ1Q6ZSZ6 1077 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 TBCBQ99426 244 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 NUF2Q9BZD4 464 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 ANLNQ9NQW6 1124 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 ACTL7BQ9Y614 415 aa13.75□□□□□ -0.21
USP42-203ENST00000426246 COL1A2P08123 1366 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 C9JVG2 144 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 RNF103O00237 685 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TM9SF1O15321 606 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
USP42-203ENST00000426246 FBXO48Q5FWF7 155 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TWF2Q6IBS0 349 aaKnown RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 SLC30A9Q6PML9 568 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 STRA8Q7Z7C7 330 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 ULK2Q8IYT8 1036 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 SH3TC2Q8TF17 1288 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 EIF2AQ9BY44 585 aaKnown RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TASP1Q9H6P5 420 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 PAPOLBQ9NRJ5 636 aaKnown RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 C20orf96Q9NUD7 363 aaPredicted RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 ADA2Q9NZK5 511 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 V9GYQ6 96 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 H3BRB1 525 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 LINGO3P0C6S8 592 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 CYP3A5P20815 502 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 CASP2P42575 452 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 CRHR2Q13324 411 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 NOMO1Q15155 1222 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TTC30AQ86WT1 665 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 IFNLR1Q8IU57 520 aaPredicted RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 MFSD3Q96ES6 412 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
USP42-203ENST00000426246 NRDE2Q9H7Z3 1164 aa13.74□□□□□ -0.21
USP42-203ENST00000426246 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms