RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 THSD1Q9NS62 852 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 FBXO2Q9UK22 296 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 SRPRBQ9Y5M8 271 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 HEMK1Q9Y5R4 338 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 UBE4BO95155 1302 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 NYNRINQ9P2P1 1898 aaKnown RBP14.8□□□□□ -0.04
HDAC6-206ENST00000426196 DOCK9Q9BZ29 2069 aa14.8□□□□□ -0.04
HDAC6-206ENST00000426196 TEX15Q9BXT5 2789 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 A0A1W2PP55 124 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 RNASEH2AO75792 299 aaKnown RBP14.79□□□□□ -0.04
HDAC6-206ENST00000426196 HARS2P49590 506 aaKnown RBP14.79□□□□□ -0.04
HDAC6-206ENST00000426196 ST8SIA6P61647 398 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 DAB2P98082 770 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 KCNJ12Q14500 433 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 PROX2Q3B8N5 592 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 KANSL1Q7Z3B3 1105 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 ZNF507Q8TCN5 953 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 USP9XQ93008 2570 aaPredicted RBP14.79□□□□□ -0.04
HDAC6-206ENST00000426196 CLIC6Q96NY7 704 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 PANK2Q9BZ23 570 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 FAM117AQ9C073 453 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 LRRC27Q9C0I9 530 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 NEUROG2Q9H2A3 272 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 SERGEFQ9UGK8 458 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 IL17BQ9UHF5 180 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 FZD4Q9ULV1 537 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 BSNQ9UPA5 3926 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 USP3Q9Y6I4 520 aa14.79□□□□□ -0.04
HDAC6-206ENST00000426196 SPTAN1Q13813 2472 aaKnown RBP14.78□□□□□ -0.04
HDAC6-206ENST00000426196 FLNCQ14315 2725 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 UNC79Q9P2D8 2635 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 WNT9AO14904 365 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 MID1O15344 667 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 EXOC3O60645 756 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 MAGEC1O60732 1142 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 USP12O75317 370 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 NTRK1P04629 796 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 LSSP48449 732 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 CST6Q15828 149 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 SGSM1Q2NKQ1 1148 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 FAM26FQ5R3K3 315 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 EPM2AIP1Q7L775 607 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-206ENST00000426196 KIAA0907Q7Z7F0 614 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-206ENST00000426196 NELFCDQ8IXH7 590 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 TMA16Q96EY4 203 aaKnown RBP14.78□□□□□ -0.04
HDAC6-206ENST00000426196 VCPIP1Q96JH7 1222 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 NT5C1AQ9BXI3 368 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 DNAI2Q9GZS0 605 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 POLR1BQ9H9Y6 1135 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 CGNQ9P2M7 1197 aaKnown RBP14.78□□□□□ -0.04
HDAC6-206ENST00000426196 CLIC4Q9Y696 253 aa14.78□□□□□ -0.04
HDAC6-206ENST00000426196 LRRK2Q5S007 2527 aa14.77□□□□□ -0.04
HDAC6-206ENST00000426196 LRRIQ3A6PVS8 624 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-206ENST00000426196 SIGLEC6O43699 453 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 SIN3BO75182 1162 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 VNN1O95497 513 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 C4BPAP04003 597 aaKnown RBP14.77□□□□□ -0.05
HDAC6-206ENST00000426196 RPN1P04843 607 aaKnown RBP14.77□□□□□ -0.05
HDAC6-206ENST00000426196 ASPAP45381 313 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 ASIC1P78348 528 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 ZNF211Q13398 564 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-206ENST00000426196 KIAA1614Q5VZ46 1190 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 NAPEPLDQ6IQ20 393 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 ZC3H3Q8IXZ2 948 aaKnown RBP14.77□□□□□ -0.05
HDAC6-206ENST00000426196 MFSD2AQ8NA29 543 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 TAF4BQ92750 862 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 DUSP16Q9BY84 665 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 TRIM4Q9C037 500 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 TNMDQ9H2S6 317 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 MTG2Q9H4K7 406 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.05
HDAC6-206ENST00000426196 A0A087X0B3 334 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 K7ENP7 123 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 SDC3O75056 442 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 SLFN14P0C7P3 912 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 KRT10P13645 584 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 ADPRHP54922 357 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 YWHAGP61981 247 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 CLDN10P78369 228 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 EHHADHQ08426 723 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 INCA1Q0VD86 236 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 OVGP1Q12889 678 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 TRIP4Q15650 581 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 KIF26BQ2KJY2 2108 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 HNRNPA1L2Q32P51 320 aaKnown RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 INO80CQ6PI98 192 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 SND1Q7KZF4 910 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 IQCHQ86VS3 1027 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 SPATS2Q86XZ4 545 aaKnown RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 MMAAQ8IVH4 418 aaKnown RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 PDILTQ8N807 584 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 ZNF557Q8N988 423 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 OR14C36Q8NHC7 312 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 PLEKHO2Q8TD55 490 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 PARD3BQ8TEW8 1205 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 CCDC97Q96F63 343 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-206ENST00000426196 TWNKQ96RR1 684 aa14.76□□□□□ -0.05
HDAC6-206ENST00000426196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms