RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 GPD2P43304 727 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 FAM193AP78312 1265 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 NADSYN1Q6IA69 706 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 ZNF366Q8N895 744 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 KDF1Q8NAX2 398 aaPredicted RBP18.43■□□□□ 0.54
GPC1-203ENST00000425056 HJURPQ8NCD3 748 aaPredicted RBP18.43■□□□□ 0.54
GPC1-203ENST00000425056 DQX1Q8TE96 717 aaKnown RBP18.43■□□□□ 0.54
GPC1-203ENST00000425056 FCRL2Q96LA5 508 aaPredicted RBP18.43■□□□□ 0.54
GPC1-203ENST00000425056 SERPINB11Q96P15 392 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 MIS12Q9H081 205 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 INTS2Q9H0H0 1204 aaKnown RBP18.43■□□□□ 0.54
GPC1-203ENST00000425056 TLR6Q9Y2C9 796 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 NEUROG3Q9Y4Z2 214 aa18.43■□□□□ 0.54
GPC1-203ENST00000425056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.43■□□□□ 0.54
GPC1-203ENST00000425056 ZZEF1O43149 2961 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 NYNRINQ9P2P1 1898 aaKnown RBP18.42■□□□□ 0.54
GPC1-203ENST00000425056 TMEM8BA6NDV4 472 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 BCAT2O15382 392 aaPredicted RBP18.42■□□□□ 0.54
GPC1-203ENST00000425056 HYAL3O43820 417 aaPredicted RBP18.42■□□□□ 0.54
GPC1-203ENST00000425056 CD70P32970 193 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 STX17P56962 302 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 ZBTB16Q05516 673 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 BEND5Q7L4P6 421 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 MFN1Q8IWA4 741 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 C1orf216Q8TAB5 229 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 STK32AQ8WU08 396 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 FAM149B1Q96BN6 582 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 SLC39A13Q96H72 371 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 LMLNQ96KR4 655 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 DDX50Q9BQ39 737 aaKnown RBP18.42■□□□□ 0.54
GPC1-203ENST00000425056 MIR1-1HGQ9H1L0 117 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 PRSS16Q9NQE7 514 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 CHD6Q8TD26 2715 aa18.42■□□□□ 0.54
GPC1-203ENST00000425056 H0Y626 953 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 TRIM16O95361 564 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 POLR2EP19388 210 aaKnown RBP18.41■□□□□ 0.54
GPC1-203ENST00000425056 ACADSBP45954 432 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 FAM124AQ86V42 546 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 NAXDQ8IW45 347 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 SCUBE3Q8IX30 993 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 FIBINQ8TAL6 211 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 MYO19Q96H55 970 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 TRIM62Q9BVG3 475 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 SRRTQ9BXP5 876 aaKnown RBP18.41■□□□□ 0.54
GPC1-203ENST00000425056 ST7Q9NRC1 585 aa18.41■□□□□ 0.54
GPC1-203ENST00000425056 EIF2B4Q9UI10 523 aaKnown RBP18.41■□□□□ 0.54
GPC1-203ENST00000425056 TYW5A2RUC4 315 aaKnown RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 SH3BP5O60239 455 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 GADD45BO75293 160 aaPredicted RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 CER1O95813 267 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 ZNF883P0CG24 379 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 KRT5P13647 590 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 ACSL1P33121 698 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 RPS14P62263 151 aaKnown RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 RPS24P62847 133 aaKnown RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 BNC1Q01954 994 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 ZNF423Q2M1K9 1284 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 DENND1BQ6P3S1 775 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 TAC4Q86UU9 113 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 TTC17Q96AE7 1141 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 MYEOVQ96EZ4 313 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 CAMK1GQ96NX5 476 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 SLC4A5Q9BY07 1137 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 NUCKS1Q9H1E3 243 aaKnown RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 C6orf106Q9H6K1 298 aaPredicted RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 STIM2Q9P246 746 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 KLK13Q9UKR3 277 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 ZMIZ1Q9ULJ6 1067 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 NAALADL1Q9UQQ1 740 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.4■□□□□ 0.54
GPC1-203ENST00000425056 MSRB2Q9Y3D2 182 aa18.4■□□□□ 0.54
GPC1-203ENST00000425056 MED7O43513 233 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 ASLP04424 464 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 RDXP35241 583 aaKnown RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 TTC31Q49AM3 519 aaPredicted RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 MS4A13Q5J8X5 152 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 ZNF776Q68DI1 518 aaPredicted RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 IL27RAQ6UWB1 636 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 ENOSF1Q7L5Y1 443 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 RAB44Q7Z6P3 723 aaPredicted RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 ADAM32Q8TC27 787 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 BTBD1Q9H0C5 482 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 UBE2TQ9NPD8 197 aaPredicted RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 SUN2Q9UH99 717 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 CYTH4Q9UIA0 394 aa18.39■□□□□ 0.53
GPC1-203ENST00000425056 INTS6Q9UL03 887 aaKnown RBP18.39■□□□□ 0.53
GPC1-203ENST00000425056 TMEM131Q92545 1883 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 E5RJQ4 531 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 PAPSS1O43252 624 aaPredicted RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 FGFR1OPO95684 399 aaKnown RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 SEMA4FO95754 770 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 IGLV3-25P01717 112 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 DNTTP04053 509 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 CSKP41240 450 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 MATKP42679 507 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 AFF3P51826 1226 aaKnown RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 CDH18Q13634 790 aa18.38■□□□□ 0.53
GPC1-203ENST00000425056 TRIP6Q15654 476 aaKnown RBP18.38■□□□□ 0.53
GPC1-203ENST00000425056 SYPL2Q5VXT5 272 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms