RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.4□□□□□ -1.54
LINC01040-201ENST00000425048 Q5PR19 223 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 HMBOX1Q6NT76 420 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 RTL10Q7L3V2 364 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 FOXP4Q8IVH2 680 aaPredicted RBP5.4□□□□□ -1.54
LINC01040-201ENST00000425048 GPR78Q96P69 363 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 EIF3CQ99613 913 aaKnown RBP5.4□□□□□ -1.54
LINC01040-201ENST00000425048 TM6SF1Q9BZW5 370 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 UNKQ9C0B0 810 aaKnown RBP5.4□□□□□ -1.54
LINC01040-201ENST00000425048 CDT1Q9H211 546 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 C6orf106Q9H6K1 298 aaPredicted RBP5.4□□□□□ -1.54
LINC01040-201ENST00000425048 RMI1Q9H9A7 625 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 B3GNT3Q9Y2A9 372 aa5.4□□□□□ -1.54
LINC01040-201ENST00000425048 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 TPP1O14773 563 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 AREL1O15033 823 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 ALADP13716 330 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 MRNIPQ6NTE8 343 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 CRTC1Q6UUV9 634 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 PRR26Q8N8Z3 221 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 IQCDQ96DY2 449 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 ABHD14AQ9BUJ0 271 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 BTBD1Q9H0C5 482 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 PRDM16Q9HAZ2 1276 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 SPAG4Q9NPE6 437 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 PLSCR4Q9NRQ2 329 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 DDX20Q9UHI6 824 aaKnown RBP5.39□□□□□ -1.55
LINC01040-201ENST00000425048 ICAM5Q9UMF0 924 aa5.39□□□□□ -1.55
LINC01040-201ENST00000425048 A0A087WZ62 844 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 SLC5A2P31639 672 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 CRYZQ08257 329 aaKnown RBP5.38□□□□□ -1.55
LINC01040-201ENST00000425048 KIAA1755Q5JYT7 1200 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 PRAMEF19Q5SWL8 479 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 NXNQ6DKJ4 435 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 CTU1Q7Z7A3 348 aaKnown RBP5.38□□□□□ -1.55
LINC01040-201ENST00000425048 TCEAL8Q8IYN2 117 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 MAGEB6Q8N7X4 407 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 DCLK3Q9C098 648 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 MAP6D1Q9H9H5 199 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 PLAC1Q9HBJ0 212 aa5.38□□□□□ -1.55
LINC01040-201ENST00000425048 KCNQ3O43525 872 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 NFATC1O95644 943 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 CYP1A2P05177 515 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 PKMP14618 531 aaKnown RBP5.37□□□□□ -1.55
LINC01040-201ENST00000425048 HOXD3P31249 432 aaPredicted RBP5.37□□□□□ -1.55
LINC01040-201ENST00000425048 PCYT1AP49585 367 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 RASSF2P50749 326 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 IZUMO4Q1ZYL8 232 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 USP17L6PQ6QN14 398 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 CYB5R4Q7L1T6 521 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 CCDC150Q8NCX0 1101 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 SRFBP1Q8NEF9 429 aaKnown RBP5.37□□□□□ -1.55
LINC01040-201ENST00000425048 OR52N4Q8NGI2 321 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 ZNF347Q96SE7 839 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 NUP62CLQ9H1M0 184 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 TBC1D14Q9P2M4 693 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 ERRFI1Q9UJM3 462 aaPredicted RBP5.37□□□□□ -1.55
LINC01040-201ENST00000425048 PCDHGB1Q9Y5G3 927 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 SNX13Q9Y5W8 968 aa5.37□□□□□ -1.55
LINC01040-201ENST00000425048 FOXO6A8MYZ6 492 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 ZNF432O94892 652 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 ART1P52961 327 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 CBFBQ13951 182 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 P3H1Q32P28 736 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 Q6ZTK2 550 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 PIK3AP1Q6ZUJ8 805 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 ZNF329Q86UD4 541 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 TMPRSS12Q86WS5 348 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 GPSM1Q86YR5 675 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 ATP11CQ8NB49 1132 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 PHKBQ93100 1093 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 LRRC46Q96FV0 321 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 NUDT22Q9BRQ3 303 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 PNPLA8Q9NP80 782 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 PTGDR2Q9Y5Y4 395 aa5.36□□□□□ -1.55
LINC01040-201ENST00000425048 CLEC18AA5D8T8 446 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 BECN2A8MW95 431 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 INAFM1C9JVW0 142 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 LINC01565O15544 149 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 GRID2O43424 1007 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 PPP6R2O75170 966 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 TGM2P21980 687 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 COMPP49747 757 aaPredicted RBP5.35□□□□□ -1.55
LINC01040-201ENST00000425048 Q0VFX4 171 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 SEMA5AQ13591 1074 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 ATP1A4Q13733 1029 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 DAG1Q14118 895 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 SLC16A12Q6ZSM3 486 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 CCDC28AQ8IWP9 274 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 PAQR4Q8N4S7 273 aaPredicted RBP5.35□□□□□ -1.55
LINC01040-201ENST00000425048 CLEC18CQ8NCF0 446 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 GRAMD1AQ96CP6 724 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 MAGEB5Q9BZ81 275 aa5.35□□□□□ -1.55
LINC01040-201ENST00000425048 KRCC1Q9NPI7 259 aaPredicted RBP5.35□□□□□ -1.55
LINC01040-201ENST00000425048 THRAP3Q9Y2W1 955 aaKnown RBP5.35□□□□□ -1.55
LINC01040-201ENST00000425048 A0A087WYN8 130 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 A0A1B0GVT2 93 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 CLCA1A8K7I4 914 aa5.34□□□□□ -1.55
LINC01040-201ENST00000425048 BTBD18B2RXH4 712 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms