RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 OLA1Q9NTK5 396 aaKnown RBP13.51□□□□□ -0.25
VRK3-203ENST00000424804 TAB2Q9NYJ8 693 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 TMEM63CQ9P1W3 806 aa13.51□□□□□ -0.25
VRK3-203ENST00000424804 TMEM131Q92545 1883 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 C10orf142B7Z368 130 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 M0QYV0 167 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 PIK3R2O00459 728 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 LATS1O95835 1130 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 CYBBP04839 570 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 SYPP08247 313 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 SLC6A4P31645 630 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 RPL34P49207 117 aaKnown RBP13.5□□□□□ -0.25
VRK3-203ENST00000424804 RGS7P49802 495 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 GCNT1Q02742 428 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 STARD3Q14849 445 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 CNGA2Q16280 664 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 WDR45BQ5MNZ6 344 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 ADGRF1Q5T601 910 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 PIK3R6Q5UE93 754 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 NADSYN1Q6IA69 706 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 TRIM65Q6PJ69 517 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
VRK3-203ENST00000424804 HDDC3Q8N4P3 179 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 CYB5D2Q8WUJ1 264 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 UCMAQ8WVF2 138 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 ORAI3Q9BRQ5 295 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 NDST4Q9H3R1 872 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 LRRC4Q9HBW1 653 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 CNGB3Q9NQW8 809 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
VRK3-203ENST00000424804 CELSR3Q9NYQ7 3312 aa13.5□□□□□ -0.25
VRK3-203ENST00000424804 A0A1B0GTW7 788 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 SRRM3A6NNA2 597 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 ZBTB24O43167 697 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 EPHX1P07099 455 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 TPM2P07951 284 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 PAEPP09466 180 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 SETSIPP0DME0 302 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 LCP1P13796 627 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 ACSL1P33121 698 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 TCP11X2Q5H9J9 407 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 CT47A1Q5JQC4 288 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 RFWD3Q6PCD5 774 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 SLCO6A1Q86UG4 719 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 ZCCHC9Q8N567 271 aaKnown RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 ZNF366Q8N895 744 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 OR2T3Q8NH03 318 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 ENOX1Q8TC92 643 aaKnown RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 TMA16Q96EY4 203 aaKnown RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 NUP58Q9BVL2 599 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 VPS16Q9H269 839 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 C6orf106Q9H6K1 298 aaPredicted RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 ABCB8Q9NUT2 735 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 SUSD2Q9UGT4 822 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 INTS6Q9UL03 887 aaKnown RBP13.49□□□□□ -0.25
VRK3-203ENST00000424804 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.49□□□□□ -0.25
VRK3-203ENST00000424804 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
VRK3-203ENST00000424804 TMEM8BA6NDV4 472 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 THAP12O43422 761 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 SYNCRIPO60506 623 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 EEF1GP26641 437 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 PON1P27169 355 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 OXTRP30559 389 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 CD70P32970 193 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 HARS2P49590 506 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 RPS14P62263 151 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 TYRO3Q06418 890 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 TRIP6Q15654 476 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 CHST9Q7L1S5 443 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 GLRX5Q86SX6 157 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 SIX6OS1Q8N1H7 587 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 BAHD1Q8TBE0 780 aaPredicted RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 IRGQQ8WZA9 623 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 AZIN2Q96A70 460 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 SLC39A13Q96H72 371 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 FCRL2Q96LA5 508 aaPredicted RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 PRICKLE1Q96MT3 831 aaPredicted RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 ZDHHC5Q9C0B5 715 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 MTG2Q9H4K7 406 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 FANCLQ9NW38 375 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 EIF2B4Q9UI10 523 aaKnown RBP13.48□□□□□ -0.25
VRK3-203ENST00000424804 GGA2Q9UJY4 613 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 DNAJC12Q9UKB3 198 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 PCOLCE2Q9UKZ9 415 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 CNTN6Q9UQ52 1028 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 NBEAQ8NFP9 2946 aa13.48□□□□□ -0.25
VRK3-203ENST00000424804 ITPR1Q14643 2758 aa13.47□□□□□ -0.25
VRK3-203ENST00000424804 H0Y626 953 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms