RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 E9PAM4 449 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 CST8O60676 142 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 NRLP54845 237 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 SLC7A9P82251 487 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 TNK2Q07912 1038 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 DPYSL2Q16555 572 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 LONRF2Q1L5Z9 754 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 PQLC3Q8N755 202 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 ASB16Q96NS5 453 aa13.89□□□□□ -0.19
PRPF39-202ENST00000424478 RPRD1AQ96P16 312 aaPredicted RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 HBS1LQ9Y450 684 aaKnown RBP13.89□□□□□ -0.19
PRPF39-202ENST00000424478 hCG_1818297A0A087WSY0 165 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 DAPK3O43293 454 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 ACSL4O60488 711 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 C1RP00736 705 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 TPI1P60174 286 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 GBE1Q04446 702 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 ANKRD20A8PQ5CZ79 823 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 RTL10Q7L3V2 364 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 DEPDC1BQ8WUY9 529 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 BTN2A3PQ96KV6 586 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 CLEC4EQ9ULY5 219 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 NEU3Q9UQ49 428 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 TACR2P21452 398 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 ITIH3Q06033 890 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 BRMS1LQ5PSV4 323 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 LRRC38Q5VT99 294 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 PRUNE1Q86TP1 453 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 NPWQ8N729 165 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 CDK5RAP1Q96SZ6 601 aaKnown RBP13.88□□□□□ -0.19
PRPF39-202ENST00000424478 CARD6Q9BX69 1037 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 ARHGEF4Q9NR80 690 aa13.88□□□□□ -0.19
PRPF39-202ENST00000424478 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
PRPF39-202ENST00000424478 TRIM24O15164 1050 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 MLLT6P55198 1093 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 CCDC181Q5TID7 509 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 NUGGCQ68CJ6 796 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 NAIF1Q69YI7 327 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 LEKR1Q6ZMV7 388 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 ATP6V0D2Q8N8Y2 350 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 CARD9Q9H257 536 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 ARHGAP26Q9UNA1 814 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 MRFAP1Q9Y605 127 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 OTOL1A6NHN0 477 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 ERCC2P18074 760 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 FCARP24071 287 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 WEE1P30291 646 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 SEMA3BQ13214 749 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 COL19A1Q14993 1142 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 TFDP3Q5H9I0 405 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 LEMD2Q8NC56 503 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 TEKT4Q8WW24 435 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.87□□□□□ -0.193e-10■■■■□ 19.3
PRPF39-202ENST00000424478 CDH7Q9ULB5 785 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 V9GYY5 206 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 SHROOM3Q8TF72 1996 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 HEPACAM2A8MVW5 462 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 KCNJ1P48048 391 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 TERF1P54274 439 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 RING1Q06587 406 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 SCAPQ12770 1279 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 SLC10A2Q12908 348 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 TMEM25Q86YD3 366 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 SLC13A5Q86YT5 568 aaPredicted RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 NAT16Q8N8M0 369 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 WFDC5Q8TCV5 224 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 TSC1Q92574 1164 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 PLD4Q96BZ4 506 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 CALR3Q96L12 384 aaKnown RBP13.87□□□□□ -0.19
PRPF39-202ENST00000424478 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 CDC23Q9UJX2 597 aa13.87□□□□□ -0.19
PRPF39-202ENST00000424478 ATG2BQ96BY7 2078 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ARSAP15289 507 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ARL4AP40617 200 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 SLC11A2P49281 568 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ZNF77Q15935 545 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ZC3H18Q86VM9 953 aaKnown RBP13.86□□□□□ -0.19
PRPF39-202ENST00000424478 UNC45BQ8IWX7 931 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 PLD5Q8N7P1 536 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 SMARCD2Q92925 531 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 HLA-CQ95604 372 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 RIPOR3Q96MK2 946 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 DOCK4Q8N1I0 1966 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 MFSD11O43934 449 aa13.86□□□□□ -0.19
PRPF39-202ENST00000424478 ASGR2P07307 311 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms