RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 USP1O94782 785 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 APBA3O96018 575 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 ITGB3P05106 788 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 APOA4P06727 396 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 STAG3L1P0CL83 205 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 CXCL8P10145 99 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 THRAP10827 490 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 CPA3P15088 417 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 GLDCP23378 1020 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 RPL5P46777 297 aaKnown RBP15.64■□□□□ 0.09
C9orf3-204ENST00000424143 GLUD2P49448 558 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 NDST1P52848 882 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 KLF10Q13118 480 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 LAMB3Q13751 1172 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 MMEL1Q495T6 779 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 PABPC1LQ4VXU2 614 aaKnown RBP15.64■□□□□ 0.09
C9orf3-204ENST00000424143 HEATR6Q6AI08 1181 aaKnown RBP15.64■□□□□ 0.09
C9orf3-204ENST00000424143 JADE1Q6IE81 842 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 BORAQ6PGQ7 559 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 KCNT2Q6UVM3 1135 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 C16orf89Q6UX73 402 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 ZCCHC23Q6ZST2 131 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 DENND5BQ6ZUT9 1274 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 SLC26A9Q7LBE3 791 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 AHI1Q8N157 1196 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 PQLC1Q8N2U9 271 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 ADCY4Q8NFM4 1077 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 UBA3Q8TBC4 463 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 RDH11Q8TC12 318 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 HTR3CQ8WXA8 447 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 PYDC1Q8WXC3 89 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 ARNTL2Q8WYA1 636 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 LZICQ8WZA0 190 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 DLG3Q92796 817 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 NDNQ99608 321 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 CDH19Q9H159 772 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 MTMR10Q9NXD2 777 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 HACD3Q9P035 362 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 BTBD7Q9P203 1132 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 CNOT11Q9UKZ1 510 aaKnown RBP15.64■□□□□ 0.09
C9orf3-204ENST00000424143 AFG3L2Q9Y4W6 797 aa15.64■□□□□ 0.09
C9orf3-204ENST00000424143 A6NJR5 290 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 KPNA7A9QM74 516 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 HBP1O60381 514 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 HMGCS2P54868 508 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 TBL3Q12788 808 aaKnown RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 SLC10A2Q12908 348 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 RFTN1Q14699 578 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 CA9Q16790 459 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 TMEM259Q4ZIN3 620 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 RALGPS1Q5JS13 557 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 STRADAQ7RTN6 431 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 TICAM1Q8IUC6 712 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 C10orf107Q8IVU9 208 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 DEFB107AQ8IZN7 70 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 MPHOSPH6Q99547 160 aaKnown RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 GPR20Q99678 358 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 SUDS3Q9H7L9 328 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 ZNF696Q9H7X3 374 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 NGRNQ9NPE2 291 aaKnown RBP15.63■□□□□ 0.09
C9orf3-204ENST00000424143 MRGBPQ9NV56 204 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 PNPOQ9NVS9 261 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 IGSF9Q9P2J2 1179 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 DERAQ9Y315 318 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 RAD54BQ9Y620 910 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 USP3Q9Y6I4 520 aa15.63■□□□□ 0.09
C9orf3-204ENST00000424143 UNCXA6NJT0 531 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 LYPLA1O75608 230 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-204ENST00000424143 VAV1P15498 845 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 RAG1P15918 1043 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-204ENST00000424143 PHKA2P46019 1235 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 SERPINB8P50452 374 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 AQP4P55087 323 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 HSP90AA5PQ58FG0 334 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 SH2D4BQ5SQS7 431 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 SCYL2Q6P3W7 929 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 UNC93AQ86WB7 457 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 RP9Q8TA86 221 aaKnown RBP15.62■□□□□ 0.09
C9orf3-204ENST00000424143 DDI1Q8WTU0 396 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 PRICKLE1Q96MT3 831 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-204ENST00000424143 CSPG4P5Q96PW8 444 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 DTNAQ9Y4J8 743 aa15.62■□□□□ 0.09
C9orf3-204ENST00000424143 WDR27A2RRH5 827 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 RGSL1A5PLK6 1076 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 MEI4A8MW99 385 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 SLCO1B7G3V0H7 640 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 CREB3O43889 395 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 POLBP06746 335 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 PEX2P28328 305 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 ALDH1A3P47895 512 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 GBE1Q04446 702 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 FOLH1Q04609 750 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 TMEM132DQ14C87 1099 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 R3HDM1Q15032 1099 aaKnown RBP15.61■□□□□ 0.09
C9orf3-204ENST00000424143 TRIP10Q15642 601 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 GOLGA7BQ2TAP0 167 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 RAB6CQ53S08 254 aa15.61■□□□□ 0.09
C9orf3-204ENST00000424143 CFAP157Q5JU67 520 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms