RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 TCP11X1B4DZS4 312 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 CREB3O43889 395 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 DGKIO75912 1065 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 RABGGTBP53611 331 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 SLC10A2Q12908 348 aaPredicted RBP17.05■□□□□ 0.32
CMTM3-202ENST00000424011 BSPRYQ5W0U4 402 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 RFX8Q6ZV50 586 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 BHLHA9Q7RTU4 235 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 FBXO36Q8NEA4 188 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 CKAP2Q8WWK9 683 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 APBB2Q92870 758 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 COLEC11Q9BWP8 271 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 YIPF3Q9GZM5 350 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 WDR6Q9NNW5 1121 aaKnown RBP17.05■□□□□ 0.32
CMTM3-202ENST00000424011 ETNK2Q9NVF9 386 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■■■□ 20.6
CMTM3-202ENST00000424011 RABGEF1Q9UJ41 708 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 SYN3O14994 580 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 TADA2AO75478 443 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 SPAG6O75602 509 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 NEFHP12036 1026 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 BLMHQ13867 455 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.32
CMTM3-202ENST00000424011 PAFAH1B3Q15102 231 aaKnown RBP17.05■□□□□ 0.32
CMTM3-202ENST00000424011 PDK1Q15118 436 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 BBS9Q3SYG4 887 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 SYCP2LQ5T4T6 812 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 CTU1Q7Z7A3 348 aaKnown RBP17.05■□□□□ 0.32
CMTM3-202ENST00000424011 LRRN4Q8WUT4 740 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 SEPT8Q92599 483 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 TMEM209Q96SK2 561 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 WDCPQ9H6R7 721 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 TSC2P49815 1807 aa17.05■□□□□ 0.32
CMTM3-202ENST00000424011 GSTA1P08263 222 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 GRIK1P39086 918 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-202ENST00000424011 KLHL38Q2WGJ6 581 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 SLC30A9Q6PML9 568 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 MFN1Q8IWA4 741 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 CCDC63Q8NA47 563 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 HTR3CQ8WXA8 447 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 ZNF333Q96JL9 665 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 L3MBTL1Q9Y468 752 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 SPAG7O75391 227 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 PIAS1O75925 651 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 RTN3O95197 1032 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-202ENST00000424011 CXCR3P49682 368 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
CMTM3-202ENST00000424011 DPYSQ14117 519 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 ARHGEF18Q6ZSZ5 1173 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 MCUQ8NE86 351 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 CCDC110Q8TBZ0 833 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 ADAM32Q8TC27 787 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 EDEM1Q92611 657 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 FUBP3Q96I24 572 aaKnown RBP eCLIP17.04■□□□□ 0.32
CMTM3-202ENST00000424011 ZCWPW1Q9H0M4 648 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 ABCC13Q9NSE7 274 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 SENP1Q9P0U3 644 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 SAMD15Q9P1V8 674 aa17.04■□□□□ 0.32
CMTM3-202ENST00000424011 A6NHS1 94 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 F8W810 466 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 ENPP3O14638 875 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 NCAM2O15394 837 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 HOXA2O43364 376 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 LINGO3P0C6S8 592 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 STX2P32856 288 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 GEMIN4P57678 1058 aaKnown RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 TPI1P60174 286 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 TBC1D25Q3MII6 688 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 CWF19L1Q69YN2 538 aaKnown RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 FBXO46Q6PJ61 603 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 FBF1Q8TES7 1133 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 EPAS1Q99814 870 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 NSRP1Q9H0G5 558 aaKnown RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 TRABDQ9H4I3 376 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 ETNK1Q9HBU6 452 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 FGFR1OP2Q9NVK5 253 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 FAM47DPA6NHR8 397 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 CCT8L1PA6NM43 557 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 B4GALT3O60512 393 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 NBNO60934 754 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 APRTP07741 180 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 KRT15P19012 456 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 CYP2C18P33260 490 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 FDFT1P37268 417 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 GLUD2P49448 558 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 SEMA3BQ13214 749 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 IGDCC3Q8IVU1 814 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 DBF4BQ8NFT6 615 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 AGAP11Q8TF27 550 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 LRRC39Q96DD0 335 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 PLCD4Q9BRC7 762 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 LRFN2Q9ULH4 789 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 SLC12A4Q9UP95 1085 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms